RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 MRPL48Q96GC5 212 aaKnown RBP10.54□□□□□ -0.72
SKA1-203ENST00000417656 ZNF649Q9BS31 505 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 JAM3Q9BX67 310 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 GSX1Q9H4S2 264 aaPredicted RBP10.54□□□□□ -0.72
SKA1-203ENST00000417656 ISG20L2Q9H9L3 353 aaKnown RBP10.54□□□□□ -0.72
SKA1-203ENST00000417656 GCM1Q9NP62 436 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 TMEM106BQ9NUM4 274 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 PPP1R3CQ9UQK1 317 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.53□□□□□ -0.72
SKA1-203ENST00000417656 A0A1B0GTI1 187 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 LOC107986453A0A1B0GWG9 222 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 ZNF850A8MQ14 1090 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 WNT9BO14905 357 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 GMDSO60547 372 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 DHRS3O75911 302 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 HTR1AP08908 422 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 TACSTD2P09758 323 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 FAHP16930 419 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 VHLP40337 213 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 MAP2K3P46734 347 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 HSPA13P48723 471 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 ETV1P50549 477 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 TMEM33P57088 247 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 NANOS3P60323 173 aaKnown RBP10.53□□□□□ -0.72
SKA1-203ENST00000417656 KRTAP1-1Q07627 177 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 PRDX4Q13162 271 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 SNCBQ16143 134 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 AHSA2Q719I0 299 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 KCTD20Q7Z5Y7 419 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 WDR86Q86TI4 376 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 BIVMQ86UB2 503 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 FTMTQ8N4E7 242 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 BPIFB6Q8NFQ5 453 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 SEMA6DQ8NFY4 1073 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 OR2G2Q8NGZ5 317 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 OR8S1Q8NH09 359 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 PIGCQ92535 297 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 GGHQ92820 318 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 ANKRD60Q9BZ19 345 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 FGF23Q9GZV9 251 aaPredicted RBP10.53□□□□□ -0.72
SKA1-203ENST00000417656 UFSP2Q9NUQ7 469 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 DIMT1Q9UNQ2 313 aaKnown RBP10.53□□□□□ -0.72
SKA1-203ENST00000417656 WIPI2Q9Y4P8 454 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 ABCA2Q9BZC7 2435 aa10.53□□□□□ -0.72
SKA1-203ENST00000417656 TEP1Q99973 2627 aaKnown RBP10.52□□□□□ -0.73
SKA1-203ENST00000417656 ZNF816-ZNF321PA0A0X1KG74 233 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 LOC100289279A0A1B0GTE1 492 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 A0A1B0GVI7 797 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 ISPDA4D126 451 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 EFCAB10A6NFE3 127 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 RRP9O43818 475 aaKnown RBP10.52□□□□□ -0.73
SKA1-203ENST00000417656 MTRF1O75570 445 aaKnown RBP10.52□□□□□ -0.73
SKA1-203ENST00000417656 LY6G6DO95868 133 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 CYB5R3P00387 301 aaPredicted RBP10.52□□□□□ -0.73
SKA1-203ENST00000417656 CST4P01036 141 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 UBCP0CG48 685 aaKnown RBP10.52□□□□□ -0.73
SKA1-203ENST00000417656 PIPP12273 146 aaPredicted RBP10.52□□□□□ -0.73
SKA1-203ENST00000417656 ATP6V1B1P15313 513 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 ZNF16P17020 682 aaPredicted RBP10.52□□□□□ -0.73
SKA1-203ENST00000417656 MYL12AP19105 171 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 CCL1P22362 96 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 MYF6P23409 242 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 DCKP27707 260 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 IL2RGP31785 369 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 PMELP40967 661 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 GATA4P43694 442 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 CHN2P52757 468 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 SLC3A1Q07837 685 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 MPPED2Q15777 294 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 TMEM249Q2WGJ8 235 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 OR2G6Q5TZ20 316 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 FDX2Q6P4F2 183 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 CLEC9AQ6UXN8 241 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 DOK3Q7L591 496 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 KLBQ86Z14 1044 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 ZDHHC23Q8IYP9 409 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 CELF2-AS1Q8N7Q2 184 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 PLPP7Q8NBV4 271 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 CLDND2Q8NHS1 167 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 HPSE2Q8WWQ2 592 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 ITPKCQ96DU7 683 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 TIMD4Q96H15 378 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 TMEM80Q96HE8 168 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 MYCBPQ99417 103 aaPredicted RBP10.52□□□□□ -0.73
SKA1-203ENST00000417656 CNOT2Q9NZN8 540 aaKnown RBP10.52□□□□□ -0.73
SKA1-203ENST00000417656 FRRS1LQ9P0K9 344 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 PSORS1C1Q9UIG5 152 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 ENPP5Q9UJA9 477 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 PIGLQ9Y2B2 252 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 EXOSC1Q9Y3B2 195 aaKnown RBP10.52□□□□□ -0.73
SKA1-203ENST00000417656 MPC1Q9Y5U8 109 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 V9GYS6 101 aa10.52□□□□□ -0.73
SKA1-203ENST00000417656 A6NLC8 198 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 ANXA2P2A6NMY6 339 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 E9PI62 339 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 TMEM178BH3BS89 294 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 SLC1A7O00341 560 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 SYT7O43581 403 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 LMX1BO60663 402 aa10.51□□□□□ -0.73
SKA1-203ENST00000417656 PTBP3O95758 552 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms