RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	KLHL22	Q53GT1	634 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	PLEKHG7	Q6ZR37	379 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	ZNF679	Q8IYX0	411 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	TEX29	Q8N6K0	151 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	ACBD7	Q8N6N7	88 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	SPATA3	Q8NHX4	192 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	ERGIC1	Q969X5	290 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	MRO	Q9BYG7	248 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	PATZ1	Q9HBE1	687 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	FGF20	Q9NP95	211 aa	Predicted RBP	13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	PLCXD1	Q9NUJ7	323 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	MRM2	Q9UI43	246 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	PSORS1C1	Q9UIG5	152 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	PCDHB10	Q9UN67	800 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521	PCDHGB1	Q9Y5G3	927 aa		13.78	□□□□□ -0.2
DDR1-231	ENST00000417521		A0A0G2JMP0	313 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521		A0A0X1KG70	313 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	LRRC30	A6NM36	301 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	RNF212B	A8MTL3	300 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	SLC1A7	O00341	560 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	XRCC2	O43543	280 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	DENR	O43583	198 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	GMDS	O60547	372 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	FSTL3	O95633	263 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	IGHA1	P01876	353 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	CPT2	P23786	658 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	MDH2	P40926	338 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	CD200	P41217	278 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	EGR3	Q06889	387 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	HNRNPA0	Q13151	305 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	MAB21L1	Q13394	359 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	ZMYND11	Q15326	602 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	GLYATL3	Q5SZD4	288 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	ZNF684	Q5T5D7	378 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	LHFPL3	Q86UP9	236 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	MUC20	Q8N307	709 aa	Predicted RBP	13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	OR4M2	Q8NGB6	313 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	OR2AE1	Q8NHA4	323 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	SPSB4	Q96A44	273 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521		Q9H521	79 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	BRD7	Q9NPI1	651 aa		13.77	□□□□□ -0.21
DDR1-231	ENST00000417521	PPIAL4E	A0A075B759	164 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	PPIAL4C	A0A0B4J2A2	164 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	GGT3P	A6NGU5	568 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	PPIAL4D	F5H284	164 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521		J3QLI3	93 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	FOXH1	O75593	365 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	PPIAL4F	P0DN26	164 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	DDOST	P39656	456 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	ZNF121	P58317	390 aa	Predicted RBP	13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	TP53I3	Q53FA7	332 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	DEGS2	Q6QHC5	323 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	AHSA2	Q719I0	299 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	PRSS45	Q7RTY3	260 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	MOGAT3	Q86VF5	341 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	C1orf87	Q8N0U7	546 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	ZNF649	Q9BS31	505 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	MRPL15	Q9P015	296 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	METRN	Q9UJH8	293 aa		13.76	□□□□□ -0.21
DDR1-231	ENST00000417521	EFCAB10	A6NFE3	127 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	PTGES3L	E9PB15	166 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	ZNF254	O75437	659 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	KRT8	P05787	483 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	ANXA2	P07355	339 aa	Known RBP	13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	CA6	P23280	308 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	RBMX	P38159	391 aa	Known RBP	13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	RIDA	P52758	137 aa	Known RBP	13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	PSMA6	P60900	246 aa	Known RBP	13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	ST3GAL4	Q11206	333 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	SCGB2A2	Q13296	93 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	OR8G1	Q15617	311 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	DCAF12L2	Q5VW00	463 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	FAM57B	Q71RH2	274 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	KLB	Q86Z14	1044 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	YIPF7	Q8N8F6	280 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	SPERT	Q8NA61	448 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	PLPP7	Q8NBV4	271 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	OR52H1	Q8NGJ2	320 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521		Q8TCH9	128 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	SGCD	Q92629	289 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	ALG8	Q9BVK2	526 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	TMPRSS13	Q9BYE2	586 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	TMEM165	Q9HC07	324 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	FKBP14	Q9NWM8	211 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	ERVK13-1	Q9NX77	482 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	GNG8	Q9UK08	70 aa		13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.75	□□□□□ -0.21
DDR1-231	ENST00000417521	IGHV3-64D	A0A0J9YX35	117 aa		13.74	□□□□□ -0.21
DDR1-231	ENST00000417521	IRGM	A1A4Y4	181 aa		13.74	□□□□□ -0.21
DDR1-231	ENST00000417521	METTL15	A6NJ78	407 aa		13.74	□□□□□ -0.21
DDR1-231	ENST00000417521		F5H0A9	414 aa	Predicted RBP	13.74	□□□□□ -0.21
DDR1-231	ENST00000417521	RPP14	O95059	124 aa	Known RBP	13.74	□□□□□ -0.21
DDR1-231	ENST00000417521	PTBP3	O95758	552 aa	Known RBP	13.74	□□□□□ -0.21
DDR1-231	ENST00000417521	CYB5R3	P00387	301 aa	Predicted RBP	13.74	□□□□□ -0.21
DDR1-231	ENST00000417521	LIMS3	P0CW19	117 aa		13.74	□□□□□ -0.21
DDR1-231	ENST00000417521	LIMS4	P0CW20	117 aa		13.74	□□□□□ -0.21
DDR1-231	ENST00000417521	PIP	P12273	146 aa	Predicted RBP	13.74	□□□□□ -0.21
DDR1-231	ENST00000417521	CFL1	P23528	166 aa	Known RBP	13.74	□□□□□ -0.21
DDR1-231	ENST00000417521	ZFP36	P26651	326 aa	Known RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms