RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 ZNF391Q9UJN7 358 aa15.29■□□□□ 0.04
VPS16-204ENST00000417508 PCDHGB1Q9Y5G3 927 aa15.29■□□□□ 0.04
VPS16-204ENST00000417508 MPC1Q9Y5U8 109 aa15.29■□□□□ 0.04
VPS16-204ENST00000417508 ANXA2P2A6NMY6 339 aa15.28■□□□□ 0.04
VPS16-204ENST00000417508 TOX4O94842 621 aa15.28■□□□□ 0.04
VPS16-204ENST00000417508 GYPAP02724 150 aa15.28■□□□□ 0.04
VPS16-204ENST00000417508 CDK5Q00535 292 aa15.28■□□□□ 0.04
VPS16-204ENST00000417508 PDCD1Q15116 288 aa15.28■□□□□ 0.04
VPS16-204ENST00000417508 SLC35D3Q5M8T2 416 aa15.28■□□□□ 0.04
VPS16-204ENST00000417508 METTL11BQ5VVY1 283 aa15.28■□□□□ 0.04
VPS16-204ENST00000417508 C12orf43Q96C57 262 aaKnown RBP15.28■□□□□ 0.04
VPS16-204ENST00000417508 FAM71F1Q96KD3 344 aaPredicted RBP15.28■□□□□ 0.04
VPS16-204ENST00000417508 MICU1Q9BPX6 476 aa15.28■□□□□ 0.04
VPS16-204ENST00000417508 PCGF1Q9BSM1 259 aa15.28■□□□□ 0.04
VPS16-204ENST00000417508 DNAJC27Q9NZQ0 273 aa15.28■□□□□ 0.04
VPS16-204ENST00000417508 GPR37O15354 613 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 E2F6O75461 281 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 DEFB112Q30KQ8 113 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 DNAL1Q4LDG9 190 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 PLBD1Q6P4A8 553 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 BRD3OSQ6XYD6 125 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 Q6YL49 198 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 TMEM179BQ7Z7N9 219 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 CPOQ8IVL8 374 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 TMEM86BQ8N661 226 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 THEM6Q8WUY1 208 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 LRRC29Q8WV35 223 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 WDFY2Q96P53 400 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 AMELYQ99218 206 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 TLNRD1Q9H1K6 362 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 ZNF319Q9P2F9 582 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 RHBDD3Q9Y3P4 386 aa15.27■□□□□ 0.04
VPS16-204ENST00000417508 A0A1B0GUS0 222 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 ACOD1A6NK06 481 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 SRRM5B3KS81 715 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 DVL1O14640 695 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 TMPRSS2O15393 492 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 GYG2O15488 501 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 CST4P01036 141 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 MMP9P14780 707 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 HOXA4Q00056 320 aaPredicted RBP15.26■□□□□ 0.03
VPS16-204ENST00000417508 KLHL12Q53G59 568 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 ATPAF1Q5TC12 328 aaPredicted RBP15.26■□□□□ 0.03
VPS16-204ENST00000417508 DEGS2Q6QHC5 323 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 WDR82Q6UXN9 313 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 BTN2A1Q7KYR7 527 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 SLC36A1Q7Z2H8 476 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 OR10Z1Q8NGY1 313 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 GATAD2BQ8WXI9 593 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 DNAJC9Q8WXX5 260 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 NRBF2Q96F24 287 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 RTL8AQ9BWD3 113 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 PAPOLGQ9BWT3 736 aaKnown RBP15.26■□□□□ 0.03
VPS16-204ENST00000417508 SLITRK2Q9H156 845 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 RASSF4Q9H2L5 321 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 ZNF696Q9H7X3 374 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 CNTD2Q9H8S5 307 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 BRD7Q9NPI1 651 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 DNAJB9Q9UBS3 223 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 MMP24Q9Y5R2 645 aa15.26■□□□□ 0.03
VPS16-204ENST00000417508 SOX21Q9Y651 276 aaPredicted RBP15.26■□□□□ 0.03
VPS16-204ENST00000417508 CENPVL3A0A0U1RRI6 287 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 TMEM210A6NLX4 147 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 FAM76BQ5HYJ3 339 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 TRPM8Q7Z2W7 1104 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 WDR86Q86TI4 376 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 PAPD5Q8NDF8 572 aaKnown RBP15.25■□□□□ 0.03
VPS16-204ENST00000417508 ITPKCQ96DU7 683 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 TBX15Q96SF7 602 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 YIPF3Q9GZM5 350 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 SIRPDQ9H106 197 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 DNTTIP1Q9H147 329 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 UNKLQ9H9P5 680 aaKnown RBP15.25■□□□□ 0.03
VPS16-204ENST00000417508 SLC25A19Q9HC21 320 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 SMURF1Q9HCE7 757 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 KPTNQ9Y664 436 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 POMT1Q9Y6A1 747 aa15.25■□□□□ 0.03
VPS16-204ENST00000417508 CDIPTO14735 213 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 HOXA3O43365 443 aaPredicted RBP15.24■□□□□ 0.03
VPS16-204ENST00000417508 SELENOFO60613 162 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 CRYBA1P05813 215 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 SFTPBP07988 381 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 ALOX5APP20292 161 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 PRKACGP22612 351 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 CBX1P83916 185 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 FLOT2Q14254 428 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 GFOD2Q3B7J2 385 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 PRR31Q5SQ13 230 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 KCTD18Q6PI47 426 aaPredicted RBP15.24■□□□□ 0.03
VPS16-204ENST00000417508 KRT74Q7RTS7 529 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 SPATA24Q86W54 205 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 OR5P3Q8WZ94 311 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 TMIGD2Q96BF3 282 aa15.24■□□□□ 0.03
VPS16-204ENST00000417508 RPUSD1Q9UJJ7 312 aaKnown RBP15.24■□□□□ 0.03
VPS16-204ENST00000417508 IGHV3OR15-7A0A075B7D8 119 aa15.23■□□□□ 0.03
VPS16-204ENST00000417508 IGHV1-69DA0A0B4J2H0 117 aa15.23■□□□□ 0.03
VPS16-204ENST00000417508 TCRBV3S1A0A5B6 114 aa15.23■□□□□ 0.03
VPS16-204ENST00000417508 FKBP6O75344 327 aa15.23■□□□□ 0.03
VPS16-204ENST00000417508 IGHV1-69P01742 117 aa15.23■□□□□ 0.03
VPS16-204ENST00000417508 SLC2A5P22732 501 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms