RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 RAB12Q6IQ22 244 aa16.69■□□□□ 0.26
RAB3IP-205ENST00000417413 OR5M9Q8NGP3 310 aa16.69■□□□□ 0.26
RAB3IP-205ENST00000417413 OR6F1Q8NGZ6 308 aa16.69■□□□□ 0.26
RAB3IP-205ENST00000417413 UBASH3BQ8TF42 649 aa16.69■□□□□ 0.26
RAB3IP-205ENST00000417413 NPRL2Q8WTW4 380 aa16.69■□□□□ 0.26
RAB3IP-205ENST00000417413 XRCC2O43543 280 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 CCNKO75909 580 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 UBBP0CG47 229 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 NAT2P11245 290 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 CD79AP11912 226 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 GSK3AP49840 483 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 RAB1AP62820 205 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 SSBP1Q04837 148 aaKnown RBP16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 OR8B8Q15620 311 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 TBR1Q16650 682 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 ZNF260Q3ZCT1 412 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 TMEM42Q69YG0 159 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 SFRP4Q6FHJ7 346 aaPredicted RBP16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 TMEM53Q6P2H8 277 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 UNQ6494/PRO21346Q6UXR6 183 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 TFAP2EQ6VUC0 442 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 BTN2A1Q7KYR7 527 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 ZNF101Q8IZC7 436 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 RBMXL3Q8N7X1 1067 aaKnown RBP16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 DEDD2Q8WXF8 326 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 AQP3Q92482 292 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 AKAP1Q92667 903 aaKnown RBP eCLIP16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 RNF170Q96K19 258 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 GPER1Q99527 375 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 LPAR5Q9H1C0 372 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 SCPEP1Q9HB40 452 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 GPR173Q9NS66 373 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 NUDT15Q9NV35 164 aa16.68■□□□□ 0.26
RAB3IP-205ENST00000417413 DOCK7Q96N67 2140 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 TRAV6A0A075B6T7 132 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 TMEM8BA6NDV4 472 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 STOMP27105 288 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 PTGFRP43088 359 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 PRSS12P56730 875 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 RAB25P57735 213 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 ACACAQ13085 2346 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 PCGF3Q3KNV8 242 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 HIKESHIQ53FT3 197 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 FAM214BQ7L5A3 538 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 DPPA2Q7Z7J5 298 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 TMEM104Q8NE00 496 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 KCNG3Q8TAE7 436 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 WNT2BQ93097 391 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 ST6GAL2Q96JF0 529 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 NUDT16L1Q9BRJ7 211 aaKnown RBP16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 CEP295Q9C0D2 2601 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 TAS2R8Q9NYW2 309 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 ELF5Q9UKW6 265 aaPredicted RBP16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 DCHS1Q96JQ0 3298 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 A0A0A6YYD4 124 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 CDC14BO60729 498 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 LPLP06858 475 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 CSF1P09603 554 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 EIF2B2P49770 351 aaKnown RBP16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 C1QL2Q7Z5L3 287 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 ZNF584Q8IVC4 421 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 GCNT2Q8N0V5 402 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 C9orf106Q8NAJ2 232 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 PIGTQ969N2 578 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 CMBLQ96DG6 245 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 POM121L2Q96KW2 1035 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 GHRLQ9UBU3 117 aa16.67■□□□□ 0.26
RAB3IP-205ENST00000417413 AKAP13Q12802 2813 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 CELSR3Q9NYQ7 3312 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 SPTBN4Q9H254 2564 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 C5orf49A4QMS7 147 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 MEIS3P1A6NDR6 274 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 AHRRA9YTQ3 701 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 SCGNO76038 276 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 VEGFCP49767 419 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 RAG2P55895 527 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 CXADRP78310 365 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 TBRG1Q3YBR2 411 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 ACSF3Q4G176 576 aaPredicted RBP16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 CLVS2Q5SYC1 327 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 RPUSD3Q6P087 351 aaKnown RBP16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 PNLDC1Q8NA58 520 aaKnown RBP16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 ZCCHC14Q8WYQ9 949 aaKnown RBP16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 SPSB1Q96BD6 273 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 ZNF75AQ96N20 296 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 NICN1Q9BSH3 213 aa16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 ZMAT3Q9HA38 289 aaKnown RBP16.66■□□□□ 0.26
RAB3IP-205ENST00000417413 A0A1W2PP11 408 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 C7orf66A4D0T2 115 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 OR14I1A6ND48 311 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 DHFRP00374 187 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 MELTFP08582 738 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 H2AFB2P0C5Z0 115 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 CCL2P13500 99 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 PSMB1P20618 241 aaKnown RBP16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 IGHV1-2P23083 117 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 FAAP20Q6NZ36 180 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 OR5D18Q8NGL1 313 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 OR10R2Q8NGX6 335 aa16.65■□□□□ 0.26
RAB3IP-205ENST00000417413 ABHD17AQ96GS6 310 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms