RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 SHISA2Q6UWI4 295 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 BRD3OSQ6XYD6 125 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 FTMTQ8N4E7 242 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 LRRC29Q8WV35 223 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 PCGF1Q9BSM1 259 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 TEX12Q9BXU0 123 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 RASSF4Q9H2L5 321 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 ZNF319Q9P2F9 582 aa14.59□□□□□ -0.07
PDLIM2-208ENST00000416159 TENM1Q9UKZ4 2725 aa14.58□□□□□ -0.07
PDLIM2-208ENST00000416159 ANXA2P2A6NMY6 339 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 SELENOFO60613 162 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 TOX4O94842 621 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 IL5RAQ01344 420 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 MICBQ29980 383 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 DEFB112Q30KQ8 113 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 GFOD2Q3B7J2 385 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 SLC35D3Q5M8T2 416 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 TRPM8Q7Z2W7 1104 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 WDR86Q86TI4 376 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 CPOQ8IVL8 374 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 MICU1Q9BPX6 476 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 PAPOLGQ9BWT3 736 aaKnown RBP14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 NIPAL2Q9H841 368 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 SMURF1Q9HCE7 757 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 ABCB9Q9NP78 766 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 NOX4Q9NPH5 578 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 DNAJB9Q9UBS3 223 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 RHBDD3Q9Y3P4 386 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 MPC1Q9Y5U8 109 aa14.58□□□□□ -0.08
PDLIM2-208ENST00000416159 IGHV3OR15-7A0A075B7D8 119 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 POM121CA8CG34 1229 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 DVL1O14640 695 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 GYG2O15488 501 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 MMP9P14780 707 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 PRKACGP22612 351 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 CBX1P83916 185 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 POU4F2Q12837 409 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 FLOT2Q14254 428 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 METTL11BQ5VVY1 283 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 WDR82Q6UXN9 313 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 BTN2A1Q7KYR7 527 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 SPATA24Q86W54 205 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 HS3ST5Q8IZT8 346 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 GALNT4Q8N4A0 578 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 WDFY2Q96P53 400 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 TBX15Q96SF7 602 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 RTL8AQ9BWD3 113 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 ZNF391Q9UJN7 358 aa14.57□□□□□ -0.08
PDLIM2-208ENST00000416159 MDFIC2A0A1B0GVS7 189 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 TMPRSS2O15393 492 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 HOXA3O43365 443 aaPredicted RBP14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 FKBP6O75344 327 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 SFTPBP07988 381 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 RPS7P62081 194 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 CSNK2BP67870 215 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 PDCD1Q15116 288 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 SLC36A1Q7Z2H8 476 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 OR10Z1Q8NGY1 313 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 C12orf43Q96C57 262 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 ITPKCQ96DU7 683 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 FAM71F1Q96KD3 344 aaPredicted RBP14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 SIRPDQ9H106 197 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 TLNRD1Q9H1K6 362 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 UNKLQ9H9P5 680 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 SLC25A19Q9HC21 320 aa14.56□□□□□ -0.08
PDLIM2-208ENST00000416159 CENPVL3A0A0U1RRI6 287 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 TCRBV3S1A0A5B6 114 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 TMEM210A6NLX4 147 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 SRRM5B3KS81 715 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 CDIPTO14735 213 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 CST4P01036 141 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 ALOX5APP20292 161 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 PSMA6P60900 246 aaKnown RBP14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 ARF6P62330 175 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 RUSC1-AS1Q66K80 236 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 Q6YL49 198 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 KRT77Q7Z794 578 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 PAPD5Q8NDF8 572 aaKnown RBP14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 GATAD2BQ8WXI9 593 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 DNAJC9Q8WXX5 260 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 ST8SIA4Q92187 359 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 ITFG2Q969R8 447 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 NRBF2Q96F24 287 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 DMRTB1Q96MA1 342 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 CCL13Q99616 98 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 PPP1R3EQ9H7J1 279 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 CNTD2Q9H8S5 307 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 LAMP5Q9UJQ1 280 aa14.55□□□□□ -0.08
PDLIM2-208ENST00000416159 ACOD1A6NK06 481 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 ZNF850A8MQ14 1090 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 DYNC1I1O14576 645 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 GPR37O15354 613 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 FCN3O75636 299 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 SLC2A5P22732 501 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 PRDX4Q13162 271 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 SNAPC1Q16533 368 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 WDR38Q5JTN6 314 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 ATPAF1Q5TC12 328 aaPredicted RBP14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 TMEM236Q5W0B7 351 aa14.54□□□□□ -0.08
PDLIM2-208ENST00000416159 DEGS2Q6QHC5 323 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms