RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 HIST2H3AQ71DI3 136 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 GJC3Q8NFK1 279 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 AKR7LQ8NHP1 331 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 TRIM36Q9NQ86 728 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 PLEK2Q9NYT0 353 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 LANCL1O43813 399 aa13.52□□□□□ -0.24
SHMT2-202ENST00000414700 C4BPBP20851 252 aa13.52□□□□□ -0.24
SHMT2-202ENST00000414700 OPRM1P35372 400 aa13.52□□□□□ -0.24
SHMT2-202ENST00000414700 CAPZA2P47755 286 aa13.52□□□□□ -0.24
SHMT2-202ENST00000414700 MFGE8Q08431 387 aaPredicted RBP13.52□□□□□ -0.24
SHMT2-202ENST00000414700 ACSM1Q08AH1 577 aa13.52□□□□□ -0.24
SHMT2-202ENST00000414700 ANKRD16Q6P6B7 361 aa13.52□□□□□ -0.24
SHMT2-202ENST00000414700 PIAS4Q8N2W9 510 aaPredicted RBP13.52□□□□□ -0.24
SHMT2-202ENST00000414700 RND1Q92730 232 aa13.52□□□□□ -0.24
SHMT2-202ENST00000414700 PPP1R14AQ96A00 147 aa13.52□□□□□ -0.24
SHMT2-202ENST00000414700 CYSLTR2Q9NS75 346 aa13.52□□□□□ -0.24
SHMT2-202ENST00000414700 ZNF629Q9UEG4 869 aaPredicted RBP13.52□□□□□ -0.24
SHMT2-202ENST00000414700 ST6GALNAC2Q9UJ37 374 aa13.52□□□□□ -0.24
SHMT2-202ENST00000414700 HSPB2A8KAH6 182 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 ZNF878C9JN71 531 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 HLA-DPB1P04440 258 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 DBHP09172 617 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 H2BFMP0C1H6 154 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 HOXB1P14653 301 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-202ENST00000414700 HSPB2Q16082 182 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 GABRA6Q16445 453 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 RSPO1Q2MKA7 263 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-202ENST00000414700 TUSC1Q2TAM9 212 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 TMEM91Q6ZNR0 172 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 BEND4Q6ZU67 534 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 FAM220AQ7Z4H9 259 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 LRRC28Q86X40 367 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-202ENST00000414700 UXS1Q8NBZ7 420 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 OR2H1Q9GZK4 316 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 WNT5BQ9H1J7 359 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 NPTNQ9Y639 398 aa13.52□□□□□ -0.25
SHMT2-202ENST00000414700 MYO18BQ8IUG5 2567 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 FAM208BQ5VWN6 2430 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 A8MXE2 369 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 GABRPO00591 440 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 SGCEO43556 437 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 DOK2O60496 412 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 TCRBP04435 133 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 CD79AP11912 226 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 GNLYP22749 145 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 RIDAP52758 137 aaKnown RBP13.51□□□□□ -0.25
SHMT2-202ENST00000414700 TGFBR3Q03167 851 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 INSL4Q14641 139 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 NHLRC3Q5JS37 347 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 ELFN2Q5R3F8 820 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 ARL9Q6T311 187 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 CPEB3Q8NE35 698 aaKnown RBP13.51□□□□□ -0.25
SHMT2-202ENST00000414700 PDCD1LG2Q9BQ51 273 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 UQCC2Q9BRT2 126 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 BRD7Q9NPI1 651 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 FRRS1LQ9P0K9 344 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 COPZ2Q9P299 210 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 KLF2Q9Y5W3 355 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-202ENST00000414700 SHISA3A0PJX4 238 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 MSTNO14793 375 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 SYNGR3O43761 229 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 SRSF10O75494 262 aaKnown RBP13.51□□□□□ -0.25
SHMT2-202ENST00000414700 TACSTD2P09758 323 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 SLC2A1P11166 492 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 PRKXP51817 358 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 RAG2P55895 527 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 SLC3A1Q07837 685 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 PABPC1L2AQ5JQF8 200 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 SFRP5Q5T4F7 317 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 STAC2Q6ZMT1 411 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 NAA40Q86UY6 237 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-202ENST00000414700 PRSS35Q8N3Z0 413 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 PRR7Q8TB68 274 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 MRPL48Q96GC5 212 aaKnown RBP13.51□□□□□ -0.25
SHMT2-202ENST00000414700 PGLYRP3Q96LB9 341 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 ZNF436Q9C0F3 470 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-202ENST00000414700 PRELID3BQ9Y3B1 194 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 TIMM10BQ9Y5J6 103 aa13.51□□□□□ -0.25
SHMT2-202ENST00000414700 DVL2O14641 736 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 C1QL1O75973 258 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 RAB3AP20336 220 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 RAB1AP62820 205 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 ADORA2A-AS1P86434 159 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 BDH1Q02338 343 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 FAM27E3Q08E93 113 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 SCRN3Q0VDG4 424 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 CDK5R1Q15078 307 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 ODF4Q2M2E3 257 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 SLC36A2Q495M3 483 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 DMKNQ6E0U4 476 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-202ENST00000414700 DEGS2Q6QHC5 323 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 SYT9Q86SS6 491 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 FTMTQ8N4E7 242 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 TMED9Q9BVK6 235 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 SCPEP1Q9HB40 452 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 GTF2A1LQ9UNN4 478 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 SLC22A13Q9Y226 551 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 CADP27708 2225 aa13.5□□□□□ -0.25
SHMT2-202ENST00000414700 TRBV2A0A0J9YWF9 115 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms