RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 FAM189A1O60320 539 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 SNAPC5O75971 98 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 OR7C1O76099 320 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 H2BFMP0C1H6 154 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 UBBP0CG47 229 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 SULT1A3P0DMM9 295 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 SULT1A4P0DMN0 295 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 SLC2A2P11168 524 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 PSMB1P20618 241 aaKnown RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 FGF7P21781 194 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 MATN1P21941 496 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 USF1P22415 310 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 KDELR1P24390 212 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 HRH2P25021 359 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 FASP25445 335 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 RPL12P30050 165 aaKnown RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 CMPK1P30085 196 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 ZFP36L2P47974 494 aaKnown RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 GZMKP49863 264 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 AQP5P55064 265 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF121P58317 390 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 PAFAH1B2P68402 229 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 RHOGP84095 191 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 CDK6Q00534 326 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 PSG4Q00888 419 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 PLCXD2Q0VAA5 305 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 PLA2G7Q13093 441 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 VGLL4Q14135 290 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 FAM53BQ14153 422 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 SPHARQ15513 63 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM241Q24JQ0 296 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 COL5A1-AS1Q5SY13 56 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 CDC42EP5Q6NZY7 148 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 AGTRAPQ6RW13 159 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 OPN5Q6U736 354 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 WDR82Q6UXN9 313 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 FBXW12Q6X9E4 464 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 FRRS1Q6ZNA5 592 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 SLC25A48Q6ZT89 311 aaKnown RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 C16orf82Q7Z2V1 217 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 SNX29P2Q8IUI4 249 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF547Q8IVP9 402 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 KLHDC8BQ8IXV7 354 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 UBALD2Q8IYN6 164 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF444Q8N0Y2 327 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 ZADH2Q8N4Q0 377 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 EID2Q8N6I1 236 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 ARL14EPQ8N8R7 260 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 BMPERQ8N8U9 685 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 OR10G4Q8NGN3 311 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 OR10R2Q8NGX6 335 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 SCMH1Q96GD3 660 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 HSFY1Q96LI6 401 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 FYTTD1Q96QD9 318 aaKnown RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 S1PR3Q99500 378 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 HSPB9Q9BQS6 159 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 FAAP24Q9BTP7 215 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 REG4Q9BYZ8 158 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 CIPCQ9C0C6 399 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 MAP1LC3BQ9GZQ8 125 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 FAM234AQ9H0X4 552 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 PRORYQ9H606 182 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 SAR1AQ9NR31 198 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 OPTCQ9UBM4 332 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF230Q9UIE0 474 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 ERG28Q9UKR5 140 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 RAB22AQ9UL26 194 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 TRAPPC4Q9Y296 219 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 CHST2Q9Y4C5 530 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 AP4S1Q9Y587 144 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 U3KQ87 197 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 NUP153P49790 1475 aaKnown RBP3.13□□□□□ -1.91
SF3B1-203ENST00000414174 GOLGA3Q08378 1498 aa3.13□□□□□ -1.91
SF3B1-203ENST00000414174 PALLDQ8WX93 1383 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 INO80Q9ULG1 1556 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 YTHDC2Q9H6S0 1430 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 DENND4BO75064 1496 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 COL5A2P05997 1499 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 CIB4A0PJX0 185 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 LRIT2A6NDA9 550 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 F5H6K3 240 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 RBFOX2O43251 390 aaKnown RBP eCLIP3.12□□□□□ -1.913e-10■■□□□ 14.1
SF3B1-203ENST00000414174 PLPP2O43688 288 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 MFSD11O43934 449 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 SOX15O60248 233 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 GNG7O60262 68 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 OR7C2O60412 319 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ZIC3O60481 467 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 FAM20BO75063 409 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 MPDU1O75352 247 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 GCM2O75603 506 aaPredicted RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 GRAP2O75791 330 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 PIAS1O75925 651 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 AGFG2O95081 481 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 CDS2O95674 445 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 HPRT1P00492 218 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 CRYBA1P05813 215 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 FGF2P09038 288 aa3.12□□□□□ -1.91
SF3B1-203ENST00000414174 SNRPCP09234 159 aaKnown RBP3.12□□□□□ -1.91
SF3B1-203ENST00000414174 ALDOCP09972 364 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms