RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 XIRP1Q702N8 1843 aaKnown RBP15.45■□□□□ 0.06
PHRF1-202ENST00000413872 HSBP1L1C9JCN9 74 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 GP1BAP07359 652 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 GPM6AP51674 278 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 UBE2KP61086 200 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 PATE3B3GLJ2 98 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 DNPH1O43598 174 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 NME2P22392 152 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 SLC7A5P1Q8MH63 180 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 OR10A3P58181 314 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 SNTB1Q13884 538 aaKnown RBP15.45■□□□□ 0.06
PHRF1-202ENST00000413872 ISXQ2M1V0 245 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 KHDC1LQ5JSQ8 128 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 ARRDC1Q8N5I2 433 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 SLC39A7Q92504 469 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 GNPNAT1Q96EK6 184 aaPredicted RBP15.45■□□□□ 0.06
PHRF1-202ENST00000413872 C4orf45Q96LM5 186 aa15.45■□□□□ 0.06
PHRF1-202ENST00000413872 SPAARA0A1B0GVQ0 90 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 FMODQ06828 376 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 SLC7A6Q92536 515 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 FBXO34Q9NWN3 711 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 BRWD1Q9NSI6 2320 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 FAM90A27PA6NNH2 459 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 SNRNP70P08621 437 aaKnown RBP15.44■□□□□ 0.06
PHRF1-202ENST00000413872 GABRA4P48169 554 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 SLC37A1P57057 533 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 SCAND1P57086 179 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 PSG6Q00889 435 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 CBLN3Q6UW01 205 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 MRGPREQ86SM8 312 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 FAM58AQ8N1B3 248 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 ASB13Q8WXK3 278 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 ZG16BQ96DA0 208 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 FGF9P31371 208 aaPredicted RBP15.44■□□□□ 0.06
PHRF1-202ENST00000413872 GAB4Q2WGN9 574 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 HFEQ30201 348 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 SSX8Q7RTT4 187 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 SPRED2Q7Z698 418 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 TSEN54Q7Z6J9 526 aaKnown RBP15.44■□□□□ 0.06
PHRF1-202ENST00000413872 GNB4Q9HAV0 340 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 SDCBPO00560 298 aaPredicted RBP15.44■□□□□ 0.06
PHRF1-202ENST00000413872 SPINK14Q6IE38 97 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 EXTL1Q92935 676 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 RNF150Q9ULK6 438 aa15.44■□□□□ 0.06
PHRF1-202ENST00000413872 OR2F2O95006 317 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 KLF3P57682 345 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-202ENST00000413872 OR2F1Q13607 317 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 LSMEM1Q8N8F7 131 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 C15orf54Q8N8G6 183 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 ZDHHC16Q969W1 377 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 PLEKHA2Q9HB19 425 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 TRIP12Q14669 1992 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-202ENST00000413872 SNRPGP15A8MWD9 76 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 EML2O95834 649 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 HLA-HP01893 362 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 PPT1P50897 306 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 UBE3DQ7Z6J8 389 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 WNK3Q9BYP7 1800 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 ZNF71Q9NQZ8 489 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-202ENST00000413872 EXOGQ9Y2C4 368 aaKnown RBP15.43■□□□□ 0.06
PHRF1-202ENST00000413872 OR5B21A6NL26 309 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 JTBO76095 146 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 TAS2R45P59539 299 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 SOHLH1Q5JUK2 328 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 TMEM268Q5VZI3 342 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 B3GNTL1Q67FW5 361 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-202ENST00000413872 C16orf47Q6ZP98 133 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-202ENST00000413872 RHOUQ7L0Q8 258 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 OR10P1Q8NGE3 313 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 OR6C68A6NDL8 312 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 KRBOX1C9JBD0 128 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 RER1O15258 196 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 HRH1P35367 487 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 GNB1P62873 340 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 WDR38Q5JTN6 314 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 DCAF10Q5QP82 559 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 STPG1Q5TH74 334 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 CREB3L2Q70SY1 520 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 C17orf47Q8NEP4 570 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 SMIM4Q8WVI0 70 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 RND1Q92730 232 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 RAB33BQ9H082 229 aa15.43■□□□□ 0.06
PHRF1-202ENST00000413872 FAM221AA4D161 298 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 PLPP2O43688 288 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 SSX4O60224 188 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 AQP8O94778 261 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 OR10K2Q6IF99 312 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 CSN1S1P47710 185 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 FXNQ16595 210 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 OR2T2Q6IF00 324 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 ZNF774Q6NX45 483 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 ADGRG3Q86Y34 549 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 TMEM229BQ8NBD8 167 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 ADPRHL1Q8NDY3 354 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 SLC26A1Q9H2B4 701 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 ATPIF1Q9UII2 106 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 ATAD5Q96QE3 1844 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 CLEC3BP05452 202 aa15.42■□□□□ 0.06
PHRF1-202ENST00000413872 MDH2P40926 338 aaKnown RBP15.42■□□□□ 0.06
PHRF1-202ENST00000413872 LSM6P62312 80 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms