RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 LINC00167Q96N53 147 aa3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 SDHCQ99643 169 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 RBBP8Q99708 897 aa3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 NAPGQ99747 312 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 RHOXF2Q9BQY4 288 aa3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 TOLLIPQ9H0E2 274 aa3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 ARV1Q9H2C2 271 aa3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 ZNF442Q9H7R0 627 aa3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 RBFOX1Q9NWB1 397 aaKnown RBP3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 NDRG2Q9UN36 371 aaKnown RBP3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 KLF12Q9Y4X4 402 aa3.02□□□□□ -1.93
HMGB3P31-201ENST00000413333 TRAV8-7A0A075B6U6 113 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 LINC01619G3V211 115 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 K7EN84 100 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 TNFRSF11BO00300 401 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 MANBAO00462 879 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 PRMT5O14744 637 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 RBFOX2O43251 390 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 UPK1BO75841 260 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 SC5DO75845 299 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 GLSO94925 669 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 VAMP5O95183 116 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 SLC35G6P0C7Q6 338 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 ZNF688P0C7X2 276 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 IGFBP3P17936 291 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 GNRHRP30968 328 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 LCN1P31025 176 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 APLNRP35414 380 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 GPR4P46093 362 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 KDSRQ06136 332 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 NAB1Q13506 487 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 GPR176Q14439 515 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 TAL2Q16559 108 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 ZNF684Q5T5D7 378 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 OPN5Q6U736 354 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 Q6ZR03 302 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 SLC16A13Q7RTY0 426 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 OR10Z1Q8NGY1 313 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 OR6N2Q8NGY6 317 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 NEURL3Q96EH8 262 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 FOPNLQ96NB1 174 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 TSNAXQ99598 290 aaKnown RBP3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 SULT4A1Q9BR01 284 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 RAB1BQ9H0U4 201 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 ZNF430Q9H8G1 570 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 ZNF302Q9NR11 478 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 TREX1Q9NSU2 369 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 STMN3Q9NZ72 180 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 RAB26Q9ULW5 256 aa3.01□□□□□ -1.93
HMGB3P31-201ENST00000413333 A0A0A6YYD5 115 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 RSPH10B2B2RC85 870 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 E7EWF7 191 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 ENSAO43768 121 aaKnown RBP3□□□□□ -1.93
HMGB3P31-201ENST00000413333 ALOX12BO75342 701 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 TRBV12-3P01733 135 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 RSPH10BP0C881 870 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 GALR1P47211 349 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 MTPNP58546 118 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 PPIDQ08752 370 aaKnown RBP3□□□□□ -1.93
HMGB3P31-201ENST00000413333 C2orf54Q08AI8 447 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 VAMP3Q15836 100 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 C6orf99Q4VX62 202 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 FAM27D1Q5T7N8 215 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 TMEM236Q5W0B7 351 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 EPGNQ6UW88 154 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 WDR86Q86TI4 376 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 SAXO1Q8IYX7 474 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 SYS1Q8N2H4 156 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 TMEM256Q8N2U0 113 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 DCAKDQ8WVC6 231 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 CDKL2Q92772 493 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 NARS2Q96I59 477 aaKnown RBP3□□□□□ -1.93
HMGB3P31-201ENST00000413333 ZNF414Q96IQ9 312 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 OR4K3Q96R72 315 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 CDX2Q99626 313 aaPredicted RBP3□□□□□ -1.93
HMGB3P31-201ENST00000413333 KCNS3Q9BQ31 491 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 FRMD8P1Q9BZ68 369 aaPredicted RBP3□□□□□ -1.93
HMGB3P31-201ENST00000413333 SYT4Q9H2B2 425 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 OR51B5Q9H339 312 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 C6orf50Q9HD87 102 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 CFL2Q9Y281 166 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 SIGLEC9Q9Y336 463 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 JCADQ9P266 1359 aa3□□□□□ -1.93
HMGB3P31-201ENST00000413333 IGKV6D-21A0A0A0MT36 114 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 TRAV8-4A0A0B4J246 113 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 LINC00854A0A1B0GVQ3 168 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 A0A1B0GW15 77 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 ANKRD20A5PA0PJZ0 165 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 OR5H1A6NKK0 313 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 H0YJW9 148 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 BPY2O14599 106 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 TAAR5O14804 337 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 MYL12BO14950 172 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 SOCS1O15524 211 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 RRP8O43159 456 aaKnown RBP2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 EIF1BO60739 113 aaKnown RBP2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 PAHP00439 452 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 P01737 135 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 HLA-DQA1P01909 254 aa2.99□□□□□ -1.93
HMGB3P31-201ENST00000413333 LIPCP11150 499 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms