RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 IGLV3-19P01714 112 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 SERPINA5P05154 406 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 ZNF708P17019 499 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 CCL1P22362 96 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 CD80P33681 288 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 ECI1P42126 302 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 ZNF84P51523 738 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 THEM4Q5T1C6 240 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 OPN5Q6U736 354 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 RNF144BQ7Z419 303 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 COMMD1Q8N668 190 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 SSC4DQ8WTU2 575 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 RELTQ969Z4 430 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 C5orf34Q96MH7 638 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 SPACA5Q96QH8 159 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 MRPL13Q9BYD1 178 aaKnown RBP15.58■□□□□ 0.08
SDCBP-202ENST00000413219 OR10A2Q9H208 303 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 BANF2Q9H503 90 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 ALKBH4Q9NXW9 302 aa15.58■□□□□ 0.08
SDCBP-202ENST00000413219 F5P12259 2224 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 PMS2P1A4D2B8 440 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 GLRA1P23415 457 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 BIDP55957 195 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 SNRPEP62304 92 aaKnown RBP15.57■□□□□ 0.08
SDCBP-202ENST00000413219 FAM3AP98173 230 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 HIST1H2BAQ96A08 127 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 C14orf79Q96F83 325 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 RAB33BQ9H082 229 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 TUBA4BQ9H853 241 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 SLC22A11Q9NSA0 550 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 GSKIPQ9P0R6 139 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 GHRLQ9UBU3 117 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 MMP17Q9ULZ9 603 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 EDARQ9UNE0 448 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 LHFPL6Q9Y693 200 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 A0A0C4DFX4 3053 aa15.57■□□□□ 0.08
SDCBP-202ENST00000413219 LIPT2A6NK58 231 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 CRTAPO75718 401 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 MT-ND4LP03901 98 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 S100A9P06702 114 aaKnown RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 HCKP08631 526 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 RCC1P18754 421 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 RPL12P30050 165 aaKnown RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 PMELP40967 661 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 PPM1FP49593 454 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 CSNK1EP49674 416 aaKnown RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 CSNK2A1P68400 391 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 SMCO1Q147U7 214 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 ZNF561Q8N587 486 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 CSNK2A3Q8NEV1 391 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 OR2AJ1Q8NGZ0 328 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 EHFQ9NZC4 300 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 C14orf166Q9Y224 244 aaKnown RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 RPH3AQ9Y2J0 694 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 PIAS3Q9Y6X2 628 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 FOXI3A8MTJ6 420 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 C9JQL5 133 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 K7EPK0 472 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 CA11O75493 328 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 IFNA2P01563 188 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 HOXB5P09067 269 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 GIMD1P0DJR0 217 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 FBLP22087 321 aaKnown RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 ALDH3B1P43353 468 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 SNU13P55769 128 aaKnown RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 C17orf67Q0P5P2 114 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 RBM39Q14498 530 aaKnown RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 ARL6IP1Q15041 203 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 SMAD2Q15796 467 aaKnown RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 Q6ZRG5 221 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 DOK3Q7L591 496 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 ABHD12BQ7Z5M8 362 aaPredicted RBP15.56■□□□□ 0.08
SDCBP-202ENST00000413219 FAM71E2Q8N5Q1 922 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 OR8B12Q8NGG6 310 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 ZDHHC12Q96GR4 267 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 ZNF251Q9BRH9 671 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 TCEAL7Q9BRU2 100 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 SERINC1Q9NRX5 453 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 TUBD1Q9UJT1 453 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 STARD10Q9Y365 291 aa15.56■□□□□ 0.08
SDCBP-202ENST00000413219 HTR3BO95264 441 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 SFTPBP07988 381 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 RBMXP38159 391 aaKnown RBP15.55■□□□□ 0.08
SDCBP-202ENST00000413219 HGFACQ04756 655 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 PPA1Q15181 289 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 RTL6Q6ICC9 239 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 COMMD2Q86X83 199 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 CLCC1Q96S66 551 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 ST6GALNAC5Q9BVH7 336 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 GPR84Q9NQS5 396 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 PLA2G2EQ9NZK7 142 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 DHCR7Q9UBM7 475 aaKnown RBP15.55■□□□□ 0.08
SDCBP-202ENST00000413219 DEDDO75618 318 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 ZNF17P17021 662 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 AGAP20933 346 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 FCGR2CP31995 323 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 DHPSP49366 369 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-202ENST00000413219 SPEM2Q0P670 501 aa15.55■□□□□ 0.08
SDCBP-202ENST00000413219 IAH1Q2TAA2 248 aaPredicted RBP15.55■□□□□ 0.08
SDCBP-202ENST00000413219 EIF2S3LQ2VIR3 472 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms