RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 ST8SIA4Q92187 359 aa9.64□□□□□ -0.87
LINC00963-201ENST00000412141 PIGCQ92535 297 aa9.64□□□□□ -0.87
LINC00963-201ENST00000412141 SPSB4Q96A44 273 aa9.64□□□□□ -0.87
LINC00963-201ENST00000412141 UPRTQ96BW1 309 aa9.64□□□□□ -0.87
LINC00963-201ENST00000412141 C1orf147Q96MC9 270 aaPredicted RBP9.64□□□□□ -0.87
LINC00963-201ENST00000412141 CCL13Q99616 98 aa9.64□□□□□ -0.87
LINC00963-201ENST00000412141 CADM1Q9BY67 442 aaKnown RBP9.64□□□□□ -0.87
LINC00963-201ENST00000412141 OPA3Q9H6K4 179 aa9.64□□□□□ -0.87
LINC00963-201ENST00000412141 LAMP5Q9UJQ1 280 aa9.64□□□□□ -0.87
LINC00963-201ENST00000412141 A0A1B0GW55 424 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DVL1O14640 695 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 CDIPTO14735 213 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 TMPRSS2O15393 492 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 GSC2O15499 205 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 ENSAO43768 121 aaKnown RBP9.63□□□□□ -0.87
LINC00963-201ENST00000412141 MITFO75030 526 aaPredicted RBP9.63□□□□□ -0.87
LINC00963-201ENST00000412141 PTBP3O95758 552 aaKnown RBP9.63□□□□□ -0.87
LINC00963-201ENST00000412141 TFF1P04155 84 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DUX4L2P0CJ85 424 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DUX4L3P0CJ86 424 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DUX4L4P0CJ87 422 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DUX4L5P0CJ88 424 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DUX4L6P0CJ89 424 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DUX4L7P0CJ90 424 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 CPT2P23786 658 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 ACKR3P25106 362 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 MTNR1AP48039 350 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 ARF6P62330 175 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 PRDX4Q13162 271 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DEFB112Q30KQ8 113 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 AWAT1Q58HT5 328 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DUX4L9Q6RFH8 374 aaPredicted RBP9.63□□□□□ -0.87
LINC00963-201ENST00000412141 BCDIN3DQ7Z5W3 292 aaKnown RBP9.63□□□□□ -0.87
LINC00963-201ENST00000412141 ZNF454Q8N9F8 522 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 PLPP7Q8NBV4 271 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 OR1M1Q8NGA1 313 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 RPL3LQ92901 407 aaKnown RBP9.63□□□□□ -0.87
LINC00963-201ENST00000412141 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DACT3Q96B18 629 aaPredicted RBP9.63□□□□□ -0.87
LINC00963-201ENST00000412141 TEX12Q9BXU0 123 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 PAPOLBQ9NRJ5 636 aaKnown RBP9.63□□□□□ -0.87
LINC00963-201ENST00000412141 SNTG1Q9NSN8 517 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DNAJB11Q9UBS4 358 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 DUX4Q9UBX2 424 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 PCDHGB1Q9Y5G3 927 aa9.63□□□□□ -0.87
LINC00963-201ENST00000412141 ANXA2P2A6NMY6 339 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 PRODHO43272 600 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 FCN3O75636 299 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 TOX4O94842 621 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 FSTL3O95633 263 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 LHBP01229 141 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 OMGP23515 440 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 CFL1P23528 166 aaKnown RBP9.62□□□□□ -0.87
LINC00963-201ENST00000412141 CFHR2P36980 270 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 DAPP51397 102 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 CRISP1P54107 249 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 PRB3Q04118 309 aaPredicted RBP9.62□□□□□ -0.87
LINC00963-201ENST00000412141 IKZF1Q13422 519 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 SLC9A3R2Q15599 337 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 MICBQ29980 383 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 WDR38Q5JTN6 314 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 GPR157Q5UAW9 335 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 CD276Q5ZPR3 534 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 WDR82Q6UXN9 313 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 BTN2A1Q7KYR7 527 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 COMMD2Q86X83 199 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 PAPD5Q8NDF8 572 aaKnown RBP9.62□□□□□ -0.87
LINC00963-201ENST00000412141 CSNK2A3Q8NEV1 391 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 OR8B12Q8NGG6 310 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 FAM81AQ8TBF8 368 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 PPP1R14AQ96A00 147 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 SLC25A28Q96A46 364 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 RNF170Q96K19 258 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 LYZL4Q96KX0 146 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 MICU1Q9BPX6 476 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 SLC25A19Q9HC21 320 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 FAM53CQ9NYF3 392 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 GTF2A1LQ9UNN4 478 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 LRP12Q9Y561 859 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 PKD1L1Q8TDX9 2849 aa9.62□□□□□ -0.87
LINC00963-201ENST00000412141 ZNF879B4DU55 563 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 TNFRSF13BO14836 293 aaPredicted RBP9.61□□□□□ -0.87
LINC00963-201ENST00000412141 MAGEB4O15481 346 aaPredicted RBP9.61□□□□□ -0.87
LINC00963-201ENST00000412141 HOXA3O43365 443 aaPredicted RBP9.61□□□□□ -0.87
LINC00963-201ENST00000412141 AKR7A2O43488 359 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 NDUFA2O43678 99 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 PRKYO43930 277 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 ALOX5APP20292 161 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 SLC2A5P22732 501 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 EPHA2P29317 976 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 COMPP49747 757 aaPredicted RBP9.61□□□□□ -0.87
LINC00963-201ENST00000412141 NPY4RP50391 375 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 SLC35D3Q5M8T2 416 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 AMIGO2Q86SJ2 522 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 FAM216BQ8N7L0 139 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 LHX4Q969G2 390 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 ITPKCQ96DU7 683 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 FAM71F1Q96KD3 344 aaPredicted RBP9.61□□□□□ -0.87
LINC00963-201ENST00000412141 HIST1H2AAQ96QV6 131 aa9.61□□□□□ -0.87
LINC00963-201ENST00000412141 IL4I1Q96RQ9 567 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms