RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 TMEM61Q8N0U2 210 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 OR4K17Q8NGC6 315 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 OR5D18Q8NGL1 313 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 OR5L1Q8NGL2 311 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 OR5M1Q8NGP8 315 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 OR2G3Q8NGZ4 309 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 PHOSPHO2Q8TCD6 241 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 RXFP2Q8WXD0 754 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 CREB3L1Q96BA8 519 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 PPWD1Q96BP3 646 aaKnown RBP3.39□□□□□ -1.87
BRCA1-204ENST00000412061 RPUSD4Q96CM3 377 aaKnown RBP3.39□□□□□ -1.87
BRCA1-204ENST00000412061 BTN2A3PQ96KV6 586 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 TMEM56Q96MV1 263 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 HBEGFQ99075 208 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 GPR22Q99680 433 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 VGLL1Q99990 258 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 YTHDF1Q9BYJ9 559 aaKnown RBP3.39□□□□□ -1.87
BRCA1-204ENST00000412061 ZDHHC11Q9H8X9 412 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 SLC25A22Q9H936 323 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 HRASLSQ9HDD0 168 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 ABCB9Q9NP78 766 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 FGFR1OP2Q9NVK5 253 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 DDIT4Q9NX09 232 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 APOBEC3BQ9UH17 382 aaKnown RBP3.39□□□□□ -1.87
BRCA1-204ENST00000412061 CLEC4EQ9ULY5 219 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF257Q9Y2Q1 563 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 LRRC42Q9Y546 428 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 RAI1Q7Z5J4 1906 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-204ENST00000412061 TRAV8-4A0A0B4J246 113 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 TMEM114B3SHH9 223 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 LINC01619G3V211 115 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 H3BNH8 94 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 FABP7O15540 132 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 GALR3O60755 368 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-204ENST00000412061 NSA2O95478 260 aaKnown RBP3.38□□□□□ -1.87
BRCA1-204ENST00000412061 PTHP01270 115 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 P01737 135 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 GNAO1P09471 354 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 CD3GP09693 182 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 ERGP11308 486 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 HIST1H1CP16403 213 aaKnown RBP3.38□□□□□ -1.87
BRCA1-204ENST00000412061 RAB3BP20337 219 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 CEACAM6P40199 344 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 RPL34P49207 117 aaKnown RBP3.38□□□□□ -1.87
BRCA1-204ENST00000412061 VEGFCP49767 419 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 CAV2P51636 162 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 MTPNP58546 118 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 DR1Q01658 176 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 CKAP4Q07065 602 aaKnown RBP3.38□□□□□ -1.87
BRCA1-204ENST00000412061 MGAT3Q09327 533 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 MLLT11Q13015 90 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-204ENST00000412061 PRSS8Q16651 343 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 FAM45BPQ6NSW5 357 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 RFLNAQ6ZTI6 216 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 C10orf107Q8IVU9 208 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 HS3ST5Q8IZT8 346 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 BLIDQ8IZY5 108 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 Q8N377 158 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 SPICQ8N5J4 248 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 GPR26Q8NDV2 337 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 OR8K1Q8NGG5 319 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 ACTL9Q8TC94 416 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 ZFAND1Q8TCF1 268 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 RGP1Q92546 391 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-204ENST00000412061 OTUB2Q96DC9 234 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 VSIG2Q96IQ7 327 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 PPP1R36Q96LQ0 422 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 PSMB7Q99436 277 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 APOL4Q9BPW4 351 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 SULT4A1Q9BR01 284 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 C19orf24Q9BVV8 132 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 GFRA4Q9GZZ7 299 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 TRIM45Q9H8W5 580 aaPredicted RBP3.38□□□□□ -1.87
BRCA1-204ENST00000412061 EDA2RQ9HAV5 297 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 TRMT112Q9UI30 125 aaKnown RBP3.38□□□□□ -1.87
BRCA1-204ENST00000412061 MTCH2Q9Y6C9 303 aa3.38□□□□□ -1.87
BRCA1-204ENST00000412061 THSD7BQ9C0I4 1608 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 SLC31A2O15432 143 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 UPK1BO75841 260 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 APOEP02649 317 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 CHTF8P0CG12 524 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 ICAM2P13598 275 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 WARSP23381 471 aaKnown RBP3.37□□□□□ -1.87
BRCA1-204ENST00000412061 GRPRP30550 384 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 GTF2H1P32780 548 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 GDI2P50395 445 aaKnown RBP3.37□□□□□ -1.87
BRCA1-204ENST00000412061 NCBP2P52298 156 aaKnown RBP eCLIP3.37□□□□□ -1.87
BRCA1-204ENST00000412061 TCP10Q12799 353 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 PON3Q15166 354 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 OR1Q1Q15612 314 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 CEACAM21Q3KPI0 293 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 ACTBL2Q562R1 376 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 SYT6Q5T7P8 510 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-204ENST00000412061 OGFRL1Q5TC84 451 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-204ENST00000412061 MTERF4Q7Z6M4 381 aaKnown RBP3.37□□□□□ -1.87
BRCA1-204ENST00000412061 GAPTQ8N292 157 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 C11orf72Q8NBR9 251 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 OR51Q1Q8NH59 317 aa3.37□□□□□ -1.87
BRCA1-204ENST00000412061 SYNPRQ8TBG9 265 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms