RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 LIPNQ5VXI9 398 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 WDR25Q64LD2 544 aaPredicted RBP15.87■□□□□ 0.13
SF3A1-202ENST00000411423 SPERTQ8NA61 448 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 OR8B3Q8NGG8 313 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 HPSE2Q8WWQ2 592 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 ITPKCQ96DU7 683 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 SEH1LQ96EE3 360 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 CENPNQ96H22 339 aaPredicted RBP15.87■□□□□ 0.13
SF3A1-202ENST00000411423 OR8B2Q96RD0 313 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 PAPOLGQ9BWT3 736 aaKnown RBP15.87■□□□□ 0.13
SF3A1-202ENST00000411423 OSBPL10Q9BXB5 764 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 ESM1Q9NQ30 184 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 OR5V1Q9UGF6 321 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 AUP1Q9Y679 476 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 A0A1B0GW55 424 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.86■□□□□ 0.13
SF3A1-202ENST00000411423 IGLV3-1P01715 115 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 GYPAP02724 150 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 DUX4L2P0CJ85 424 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 DUX4L3P0CJ86 424 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 DUX4L4P0CJ87 422 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 DUX4L5P0CJ88 424 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 DUX4L6P0CJ89 424 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 DUX4L7P0CJ90 424 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 ROM1Q03395 351 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 PRDX4Q13162 271 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 LCN1P1Q5VSP4 162 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 NXNL2Q5VZ03 156 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 DUX4L9Q6RFH8 374 aaPredicted RBP15.86■□□□□ 0.13
SF3A1-202ENST00000411423 SSX6Q7RTT6 188 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 FAM90A1Q86YD7 464 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 BCL6BQ8N143 479 aaPredicted RBP15.86■□□□□ 0.13
SF3A1-202ENST00000411423 FGFRL1Q8N441 504 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 OR8S1Q8NH09 359 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 CNN2Q99439 309 aaKnown RBP15.86■□□□□ 0.13
SF3A1-202ENST00000411423 APOL4Q9BPW4 351 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 GABARAPL3Q9BY60 117 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 RASSF4Q9H2L5 321 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 RGCCQ9H4X1 137 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 SMURF1Q9HCE7 757 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 DUX4Q9UBX2 424 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 ZNF69Q9UC07 566 aa15.86■□□□□ 0.13
SF3A1-202ENST00000411423 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.85■□□□□ 0.13
SF3A1-202ENST00000411423 hCG_1807616A0A1W2PRN6 198 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 OOEPA6NGQ2 149 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 ZNF850A8MQ14 1090 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 CFL1P23528 166 aaKnown RBP15.85■□□□□ 0.13
SF3A1-202ENST00000411423 HILS1P60008 231 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 ACTR3P61158 418 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 DMRTC1Q5HYR2 192 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 DEGS2Q6QHC5 323 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 WDR82Q6UXN9 313 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 PLEKHG7Q6ZR37 379 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 SLC35F2Q8IXU6 374 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 ZNF679Q8IYX0 411 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 CSNK2A3Q8NEV1 391 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 RAB40AQ8WXH6 277 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 TLNRD1Q9H1K6 362 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 RIBC2Q9H4K1 309 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 NIPAL2Q9H841 368 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 C14orf119Q9NWQ9 140 aa15.85■□□□□ 0.13
SF3A1-202ENST00000411423 IGHV3OR16-10A0A075B7F0 116 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 A0A0A6YYJ9 748 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 TMEM269A0A1B0GVZ9 245 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 APOL3O95236 402 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 CST4P01036 141 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 IGHV4-38-2P0DP08 117 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 CPT2P23786 658 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 CXCR4P61073 352 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 TEX36Q5VZQ5 186 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 KCTD18Q6PI47 426 aaPredicted RBP15.84■□□□□ 0.13
SF3A1-202ENST00000411423 TEX29Q8N6K0 151 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 ZDHHC22Q8N966 263 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 LRRC29Q8WV35 223 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 OR5P3Q8WZ94 311 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 RPL3LQ92901 407 aaKnown RBP15.84■□□□□ 0.13
SF3A1-202ENST00000411423 UBE2FQ969M7 185 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 ZNF48Q96MX3 618 aaPredicted RBP15.84■□□□□ 0.13
SF3A1-202ENST00000411423 MRI1Q9BV20 369 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 PBOV1Q9GZY1 135 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 CLN8Q9UBY8 286 aa15.84■□□□□ 0.13
SF3A1-202ENST00000411423 MRM2Q9UI43 246 aaKnown RBP15.84■□□□□ 0.13
SF3A1-202ENST00000411423 KIR2DS1A0A191URI9 304 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 SLC22A31A6NKX4 558 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 E9PQ18 207 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 CDIPTO14735 213 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 PHYHO14832 338 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 ADAM20O43506 726 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 TTRP02766 147 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 TFF1P04155 84 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 AMY2BP19961 511 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 ARMCX4Q5H9R4 360 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 USP43Q70EL4 1123 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 NLRC3Q7RTR2 1065 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 KRT74Q7RTS7 529 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 GALNT4Q8N4A0 578 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 OR51G2Q8NGK0 314 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 OR51E1Q8TCB6 317 aa15.83■□□□□ 0.12
SF3A1-202ENST00000411423 ZNF418Q8TF45 676 aaPredicted RBP15.83■□□□□ 0.12
SF3A1-202ENST00000411423 PIGCQ92535 297 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms