RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 LMX1BO60663 402 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 MRPL33O75394 65 aaKnown RBP6.56□□□□□ -1.36
CXCR4-202ENST00000409817 SNAPC5O75971 98 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 KDM4BO94953 1096 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 LIPCP11150 499 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 ANXA3P12429 323 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 CPN1P15169 458 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 ID4P47928 161 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 SLC6A9P48067 706 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 GZMKP49863 264 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 QRFPP83859 136 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 PMPCAQ10713 525 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 PLA2G7Q13093 441 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 RNPS1Q15287 305 aaKnown RBP6.56□□□□□ -1.36
CXCR4-202ENST00000409817 KRTAP27-1Q3LI81 207 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 AWAT2Q6E213 333 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 MTFR2Q6P444 385 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 LINC00696Q6ZRV3 163 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 OR5AS1Q8N127 324 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 LRRC18Q8N456 261 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 FAM109AQ8N4B1 249 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 TMEM251Q8N6I4 163 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 DEFB124Q8NES8 71 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 OR1F12Q8NHA8 337 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 SSC4DQ8WTU2 575 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 GIMAP1Q8WWP7 306 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 GCDHQ92947 438 aaPredicted RBP6.56□□□□□ -1.36
CXCR4-202ENST00000409817 FBXO17Q96EF6 278 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 FAM71F1Q96KD3 344 aaPredicted RBP6.56□□□□□ -1.36
CXCR4-202ENST00000409817 HYLS1Q96M11 299 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 FYTTD1Q96QD9 318 aaKnown RBP6.56□□□□□ -1.36
CXCR4-202ENST00000409817 CHST5Q9GZS9 411 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 BCO1Q9HAY6 547 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 NOX3Q9HBY0 568 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 GPR35Q9HC97 309 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 PARD6AQ9NPB6 346 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 TPSG1Q9NRR2 321 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 ZNF319Q9P2F9 582 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 UPB1Q9UBR1 384 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 FBXL7Q9UJT9 491 aa6.56□□□□□ -1.36
CXCR4-202ENST00000409817 NOSIPQ9Y314 301 aaKnown RBP6.56□□□□□ -1.36
CXCR4-202ENST00000409817 ZNF318Q5VUA4 2279 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 NCKAP5O14513 1909 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 RAB27BO00194 218 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 CYB5AP00167 134 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 SLC2A1P11166 492 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 GTF2F2P13984 249 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 ABOP16442 354 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 ZNF24P17028 368 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 TBPP20226 339 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 MAGEA5P43359 124 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 GATA4P43694 442 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 MEOX1P50221 254 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 FAPQ12884 760 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 TNK1Q13470 666 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 MEF2DQ14814 521 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 SLC10A1Q14973 349 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 ARL6IP1Q15041 203 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 ZMYND11Q15326 602 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 NDUFA5Q16718 116 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 RSPO1Q2MKA7 263 aaPredicted RBP6.55□□□□□ -1.36
CXCR4-202ENST00000409817 CEACAM16Q2WEN9 425 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 SFRP4Q6FHJ7 346 aaPredicted RBP6.55□□□□□ -1.36
CXCR4-202ENST00000409817 ZNF627Q7L945 461 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 SLC16A14Q7RTX9 510 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 GALNTL5Q7Z4T8 443 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 BIVMQ86UB2 503 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 ANGPTL5Q86XS5 388 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 AQP3Q92482 292 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 SEH1LQ96EE3 360 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 RNF170Q96K19 258 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 SLC25A21Q9BQT8 299 aaPredicted RBP6.55□□□□□ -1.36
CXCR4-202ENST00000409817 URM1Q9BTM9 101 aaKnown RBP6.55□□□□□ -1.36
CXCR4-202ENST00000409817 CST11Q9H112 138 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 CDIP1Q9H305 208 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 RANBP3Q9H6Z4 567 aaPredicted RBP6.55□□□□□ -1.36
CXCR4-202ENST00000409817 EXO5Q9H790 373 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 ING4Q9UNL4 249 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 MRPS28Q9Y2Q9 187 aaKnown RBP6.55□□□□□ -1.36
CXCR4-202ENST00000409817 MYO15AQ9UKN7 3530 aa6.55□□□□□ -1.36
CXCR4-202ENST00000409817 CNTRLQ7Z7A1 2325 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 ZNF891A8MT65 544 aaPredicted RBP6.54□□□□□ -1.36
CXCR4-202ENST00000409817 A8MV72 311 aaPredicted RBP6.54□□□□□ -1.36
CXCR4-202ENST00000409817 F10P00742 488 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 CD74P04233 296 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 HCKP08631 526 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 SULT1A3P0DMM9 295 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 SULT1A4P0DMN0 295 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 NKX2-5P52952 324 aaPredicted RBP6.54□□□□□ -1.36
CXCR4-202ENST00000409817 PPIAP62937 165 aaKnown RBP6.54□□□□□ -1.36
CXCR4-202ENST00000409817 RIPPLY1Q0D2K3 151 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 UNC119Q13432 240 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 CDK10Q15131 360 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 LINC00303Q3SY05 128 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 ZNF260Q3ZCT1 412 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 STEAP1BQ6NZ63 245 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 GLDNQ6ZMI3 551 aaPredicted RBP6.54□□□□□ -1.36
CXCR4-202ENST00000409817 ZNF782Q6ZMW2 699 aaPredicted RBP6.54□□□□□ -1.36
CXCR4-202ENST00000409817 CHMP1BQ7LBR1 199 aa6.54□□□□□ -1.36
CXCR4-202ENST00000409817 DPPA2Q7Z7J5 298 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms