RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 AKR7LQ8NHP1 331 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 GRPEL2Q8TAA5 225 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 TMEM59Q9BXS4 323 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 CHST6Q9GZX3 395 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 BANF2Q9H503 90 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 PIPOXQ9P0Z9 390 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 NOSIPQ9Y314 301 aaKnown RBP17.59■□□□□ 0.41
USP39-204ENST00000409766 TIMM10BQ9Y5J6 103 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 A0A1W2PP11 408 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 NME2P1O60361 137 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 NME2P22392 152 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 PTGFRP43088 359 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 GALNTL5Q7Z4T8 443 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 BPIFB2Q8N4F0 458 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 GVQW1Q8N7I0 195 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 PNLDC1Q8NA58 520 aaKnown RBP17.58■□□□□ 0.4
USP39-204ENST00000409766 FGFBP3Q8TAT2 258 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 GPR137Q96N19 417 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 SLC6A7Q99884 636 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 PARD6AQ9NPB6 346 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 UPB1Q9UBR1 384 aa17.58■□□□□ 0.4
USP39-204ENST00000409766 PRR33A8MZF0 331 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 SSX5O60225 188 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 MRPL33O75394 65 aaKnown RBP17.57■□□□□ 0.4
USP39-204ENST00000409766 OR2A4O95047 310 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 NAT2P11245 290 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 MEF2DQ14814 521 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 PLAC9Q5JTB6 97 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 TSPO2Q5TGU0 170 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 SLC16A14Q7RTX9 510 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 C1QL2Q7Z5L3 287 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 SKA3Q8IX90 412 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 NPRL2Q8WTW4 380 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 OR2A7Q96R45 310 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 OR2H1Q9GZK4 316 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 WNT5BQ9H1J7 359 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 GHRLQ9UBU3 117 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 KCNK7Q9Y2U2 307 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 KLF13Q9Y2Y9 288 aaPredicted RBP17.57■□□□□ 0.4
USP39-204ENST00000409766 OTOGLQ3ZCN5 2332 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 UBE2QL1A1L167 161 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 OR14I1A6ND48 311 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 DHRS7CA6NNS2 312 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 SOCS1O15524 211 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 PCBD1P61457 104 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 PLGLB1Q02325 96 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 SLC22A6Q4U2R8 563 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 ATP1A1-AS1Q5TC04 95 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 PLXDC2Q6UX71 529 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 MUC20Q8N307 709 aaPredicted RBP17.57■□□□□ 0.4
USP39-204ENST00000409766 OR2AE1Q8NHA4 323 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 POFUT1Q9H488 388 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 SLC2A8Q9NY64 477 aa17.57■□□□□ 0.4
USP39-204ENST00000409766 ZNF407Q9C0G0 2248 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 CRTAPO75718 401 aaPredicted RBP17.56■□□□□ 0.4
USP39-204ENST00000409766 GSTP1P09211 210 aaKnown RBP17.56■□□□□ 0.4
USP39-204ENST00000409766 GIPP09681 153 aaPredicted RBP17.56■□□□□ 0.4
USP39-204ENST00000409766 ACKR3P25106 362 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 HTR5AP47898 357 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 MEOX1P50221 254 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 TMEM50BP56557 158 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 TGIF1Q15583 401 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 FAM189A2Q15884 450 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 NRN1LQ496H8 165 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 OR52W1Q6IF63 320 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 SEMA6DQ8NFY4 1073 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 OR5D18Q8NGL1 313 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 LILRB4Q8NHJ6 448 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 HAS2Q92819 552 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 RAB3CQ96E17 227 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 LINC00470Q9BZP3 86 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 CHIAQ9BZP6 476 aa17.56■□□□□ 0.4
USP39-204ENST00000409766 TMEM82A0PJX8 343 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 IGHV3-9P01782 118 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 MMP7P09237 267 aaPredicted RBP17.55■□□□□ 0.4
USP39-204ENST00000409766 HIST1H1DP16402 221 aaKnown RBP17.55■□□□□ 0.4
USP39-204ENST00000409766 MPZP25189 248 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 RNASE10Q5GAN6 216 aaKnown RBP17.55■□□□□ 0.4
USP39-204ENST00000409766 FAM89BQ8N5H3 189 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 OR56B1Q8NGI3 324 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 OR13C8Q8NGS7 320 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 REEP6Q96HR9 211 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 URM1Q9BTM9 101 aaKnown RBP17.55■□□□□ 0.4
USP39-204ENST00000409766 CST11Q9H112 138 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 SLC23A1Q9UHI7 598 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 DNAJC13O75165 2243 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 DISC1C4P0D8 188 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 KLRC4-KLRK1H3BQV0 150 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 CDK2AP1O14519 115 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 TOXO94900 526 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 LCATP04180 440 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 FCGR2AP12318 317 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 RPS27AP62979 156 aaKnown RBP17.55■□□□□ 0.4
USP39-204ENST00000409766 LGALSLQ3ZCW2 172 aaPredicted RBP17.55■□□□□ 0.4
USP39-204ENST00000409766 CD163Q86VB7 1156 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 MYOZ1Q9NP98 299 aaPredicted RBP17.55■□□□□ 0.4
USP39-204ENST00000409766 IFT46Q9NQC8 304 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 SLC7A10Q9NS82 523 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 FREM1Q5H8C1 2179 aa17.55■□□□□ 0.4
USP39-204ENST00000409766 SYNGR4O95473 234 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms