RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 HLA-DPB1P04440 258 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 CD55P08174 381 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 ACHEP22303 614 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 MAP2K4P45985 399 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 CHN2P52757 468 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 ACSM1Q08AH1 577 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 RIPPLY1Q0D2K3 151 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 MED22Q15528 200 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 TBCEQ15813 527 aaPredicted RBP24.93■■□□□ 1.58
USP42-202ENST00000404008 ZBTB37Q5TC79 503 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 DMKNQ6E0U4 476 aaPredicted RBP24.93■■□□□ 1.58
USP42-202ENST00000404008 KRT74Q7RTS7 529 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 ZFP41Q8N8Y5 198 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 CCDC54Q8NEL0 328 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 COMMD4Q9H0A8 199 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 NCR1O76036 304 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 CST4P01036 141 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 CDH15P55291 814 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 CCL8P80075 99 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 BDH1Q02338 343 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 OR10AC1Q8NH08 325 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 FOXC2Q99958 501 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 ADAT1Q9BUB4 502 aaKnown RBP24.93■■□□□ 1.58
USP42-202ENST00000404008 BARX1Q9HBU1 254 aaPredicted RBP24.93■■□□□ 1.58
USP42-202ENST00000404008 HHLA2Q9UM44 414 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 NOP16Q9Y3C1 178 aaKnown RBP24.93■■□□□ 1.58
USP42-202ENST00000404008 ARID1AO14497 2285 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 ZNF816-ZNF321PA0A0X1KG74 233 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 GMDSO60547 372 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 LY6HO94772 140 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 RPSAP08865 295 aaKnown RBP24.92■■□□□ 1.58
USP42-202ENST00000404008 FAHP16930 419 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 ZNF12P17014 697 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 TNFSF4P23510 183 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 OR8G1Q15617 311 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 OR51A4Q8NGJ6 313 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 PAPOLGQ9BWT3 736 aaKnown RBP24.92■■□□□ 1.58
USP42-202ENST00000404008 PPP1R3EQ9H7J1 279 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 DECR2Q9NUI1 292 aa24.92■■□□□ 1.58
USP42-202ENST00000404008 LMX1BO60663 402 aa24.91■■□□□ 1.58
USP42-202ENST00000404008 HPXP02790 462 aa24.91■■□□□ 1.58
USP42-202ENST00000404008 TNFAIP6P98066 277 aaPredicted RBP24.91■■□□□ 1.58
USP42-202ENST00000404008 EMX1Q04741 257 aaPredicted RBP24.91■■□□□ 1.58
USP42-202ENST00000404008 ZNF773Q6PK81 442 aa24.91■■□□□ 1.58
USP42-202ENST00000404008 SPARTQ8N0X7 666 aa24.91■■□□□ 1.58
USP42-202ENST00000404008 DVL3Q92997 716 aaPredicted RBP24.91■■□□□ 1.58
USP42-202ENST00000404008 ACOT13Q9NPJ3 140 aa24.91■■□□□ 1.58
USP42-202ENST00000404008 IL19Q9UHD0 177 aa24.91■■□□□ 1.58
USP42-202ENST00000404008 ENPP5Q9UJA9 477 aa24.91■■□□□ 1.58
USP42-202ENST00000404008 TANC2Q9HCD6 1990 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 F5H5P2 479 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 TNFAIP8O95379 198 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 GNALP38405 381 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 SLC3A1Q07837 685 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 PRDX4Q13162 271 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 SPRNQ5BIV9 151 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 PIGCQ92535 297 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 RGP1Q92546 391 aaPredicted RBP24.9■■□□□ 1.58
USP42-202ENST00000404008 GHSRQ92847 366 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 PGLYRP3Q96LB9 341 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 EGLN1Q9GZT9 426 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 SAP30LQ9HAJ7 183 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 PLEKHA1Q9HB21 404 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 MPC1Q9Y5U8 109 aa24.9■■□□□ 1.58
USP42-202ENST00000404008 OTOGQ6ZRI0 2925 aa24.89■■□□□ 1.58
USP42-202ENST00000404008 ZNF850A8MQ14 1090 aa24.89■■□□□ 1.57
USP42-202ENST00000404008 TPD52L2O43399 206 aaKnown RBP24.89■■□□□ 1.57
USP42-202ENST00000404008 PLPP2O43688 288 aa24.89■■□□□ 1.57
USP42-202ENST00000404008 CELP19835 753 aa24.89■■□□□ 1.57
USP42-202ENST00000404008 SVOPQ8N4V2 548 aa24.89■■□□□ 1.57
USP42-202ENST00000404008 OR2V2Q96R30 315 aa24.89■■□□□ 1.57
USP42-202ENST00000404008 CCDC168Q8NDH2 2452 aa24.89■■□□□ 1.57
USP42-202ENST00000404008 PNMA8CA0A1B0GUJ8 204 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 A6NIN4 97 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 SSX4O60224 188 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 CD1AP06126 327 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 TESK1Q15569 626 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 TMEM42Q69YG0 159 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 OR13C3Q8NGS6 347 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 UBASH3BQ8TF42 649 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 C10orf35Q96D05 121 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 ITPKCQ96DU7 683 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 CXXC4Q9H2H0 198 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 ABCB9Q9NP78 766 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 ISYNA1Q9NPH2 558 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 ZNF281Q9Y2X9 895 aa24.88■■□□□ 1.57
USP42-202ENST00000404008 DAOP14920 347 aa24.87■■□□□ 1.57
USP42-202ENST00000404008 PCMT1P22061 227 aa24.87■■□□□ 1.57
USP42-202ENST00000404008 CD200P41217 278 aa24.87■■□□□ 1.57
USP42-202ENST00000404008 ART1P52961 327 aa24.87■■□□□ 1.57
USP42-202ENST00000404008 MAB21L1Q13394 359 aa24.87■■□□□ 1.57
USP42-202ENST00000404008 ZNF367Q7RTV3 350 aa24.87■■□□□ 1.57
USP42-202ENST00000404008 ZDHHC23Q8IYP9 409 aa24.87■■□□□ 1.57
USP42-202ENST00000404008 SPERTQ8NA61 448 aa24.87■■□□□ 1.57
USP42-202ENST00000404008 ITLN1Q8WWA0 313 aa24.87■■□□□ 1.57
USP42-202ENST00000404008 MEGF10Q96KG7 1140 aa24.87■■□□□ 1.57
USP42-202ENST00000404008 ZNF275Q9NSD4 429 aaPredicted RBP24.87■■□□□ 1.57
USP42-202ENST00000404008 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP24.86■■□□□ 1.57
USP42-202ENST00000404008 SRP9P49458 86 aaKnown RBP24.86■■□□□ 1.57
USP42-202ENST00000404008 CLVS2Q5SYC1 327 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms