RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 REEP1Q9H902 201 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 C8orf17Q9NRJ1 99 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 TMEM100Q9NV29 134 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 CHMP5Q9NZZ3 219 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 FARSAQ9Y285 508 aaKnown RBP2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 GMEB1Q9Y692 573 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 FHOD3Q2V2M9 1422 aa2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 NUP214P35658 2090 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P17-201ENST00000403495 MAP3K19Q56UN5 1328 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 IGHV3OR16-9A0A0B4J2B5 98 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 A0A1W2PRF3 423 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 A0A1W2PRM7 423 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 ERICH2A1L162 156 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 RAB19A4D1S5 217 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 COLCA2A8K830 154 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 HACD1B0YJ81 288 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 K7EM74 188 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 BPY2O14599 106 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 HLA-DQA1P01909 254 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 KLK1P06870 262 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 MUC1P15941 1255 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 LCN1P31025 176 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 OPRK1P41145 380 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 AP1S2P56377 157 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 CDC20Q12834 499 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 KDM4DQ6B0I6 523 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 RWDD4Q6NW29 188 aaKnown RBP2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 RBM45Q8IUH3 476 aaKnown RBP2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 SLC30A8Q8IWU4 369 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 TMEM256Q8N2U0 113 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 LINC01560Q8TB33 94 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 KCNS1Q96KK3 526 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 GLT1D1Q96MS3 346 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 GPR21Q99679 349 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 KIR3DX1Q9H7L2 352 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 TREM1Q9NP99 234 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 CABIN1Q9Y6J0 2220 aa2.29□□□□□ -2.04
HMGB1P17-201ENST00000403495 IGKV2-28A0A075B6P5 120 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 OR5H1A6NKK0 313 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 RFXANKO14593 260 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 CETN3O15182 167 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 CHST10O43529 356 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 GMDSO60547 372 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 CTNSO60931 367 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 GLSO94925 669 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 IGKV2D-28P01615 120 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 TACSTD2P09758 323 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZNF286BP0CG31 522 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 CCL2P13500 99 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 MYL9P24844 172 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 DEKP35659 375 aaKnown RBP2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 CSKP41240 450 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 CXCL12P48061 93 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 ATP5J2P56134 94 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 CLDN6P56747 220 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 PSMC5P62195 406 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 PITPNAQ00169 270 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 SIGLEC14Q08ET2 396 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 XRCC4Q13426 336 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 ANGPT1Q15389 498 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 SHHQ15465 462 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 VAMP3Q15836 100 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 USF2Q15853 346 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 OPN5Q6U736 354 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 RTL4Q6ZR62 310 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 PID1Q7Z2X4 250 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 OR2W3Q7Z3T1 314 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 TTLQ8NG68 377 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 OR8D1Q8WZ84 308 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 CDS1Q92903 461 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 RERGQ96A58 199 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 TMEM159Q96B96 161 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZBED3Q96IU2 234 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 RNF5Q99942 180 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 TIMM29Q9BSF4 260 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 OSBPL11Q9BXB4 747 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 RAB1BQ9H0U4 201 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZNF302Q9NR11 478 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 CYTL1Q9NRR1 136 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 ZNF257Q9Y2Q1 563 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 RBMX2Q9Y388 322 aaKnown RBP2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 RFNGQ9Y644 331 aa2.28□□□□□ -2.04
HMGB1P17-201ENST00000403495 DOCK9Q9BZ29 2069 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 YEATS2Q9ULM3 1422 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 A0A0B4J2E0 115 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 C7orf66A4D0T2 115 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 RAD1O60671 282 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 MPZL1O95297 269 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 CCNE2O96020 404 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 CISD3P0C7P0 127 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 ZNF688P0C7X2 276 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 ME2P23368 584 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 SPAM1P38567 509 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 PNOCQ13519 176 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 DMC1Q14565 340 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 SYCP1Q15431 976 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 OR1Q1Q15612 314 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 NDUFAF6Q330K2 333 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 C6orf99Q4VX62 202 aa2.27□□□□□ -2.05
HMGB1P17-201ENST00000403495 TMEM236Q5W0B7 351 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms