RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMEM219Q86XT9 240 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MKXQ8IYA7 352 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR8J3Q8NGG0 315 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR9Q1Q8NGQ5 310 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ANGPTL6Q8NI99 470 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 RSRC1Q96IZ7 334 aaKnown RBP9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 RAB3IPQ96QF0 476 aaPredicted RBP9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 KRTAP17-1Q9BYP8 105 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 TLNRD1Q9H1K6 362 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 RABEP2Q9H5N1 569 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 INPP5EQ9NRR6 644 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 RAB21Q9UL25 225 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 AURKCQ9UQB9 309 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 NOP16Q9Y3C1 178 aaKnown RBP9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 A6NDX4 124 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 FAM220BPB1ANY3 271 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ANGPTL7O43827 346 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 HIST1H1CP16403 213 aaKnown RBP9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CRABP1P29762 137 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 PRKXP51817 358 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 FAM3AP98173 230 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CD69Q07108 199 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 PLA1AQ53H76 456 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 LRRC10Q5BKY1 277 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 NCR3LG1Q68D85 454 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 PGM2L1Q6PCE3 622 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DPY19L4Q7Z388 723 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OR4K13Q8NH42 304 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SPSB4Q96A44 273 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 C12orf43Q96C57 262 aaKnown RBP9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OCSTAMPQ9BR26 566 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 FUZQ9BT04 418 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 RPRD1BQ9NQG5 326 aaKnown RBP9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 C19orf12Q9NSK7 152 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 HAO2Q9NYQ3 351 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ZNF319Q9P2F9 582 aa9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SLC25A10Q9UBX3 287 aaPredicted RBP9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SF3B6Q9Y3B4 125 aaKnown RBP9.58□□□□□ -0.88
SPTLC1P3-201ENST00000403408 TRBV4-1A0A0J9YWV2 114 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 TVP23AA6NH52 213 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 NKX6-3A6NJ46 265 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SIGLEC5O15389 551 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 IFNA14P01570 189 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 IFNW1P05000 195 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 PYCR1P32322 319 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CYLC2Q14093 348 aaPredicted RBP9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ERICH5Q6P6B1 374 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SLC16A9Q7RTY1 509 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ZNRF1Q8ND25 227 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 RPL3LQ92901 407 aaKnown RBP9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SGK3Q96BR1 496 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ERMAPQ96PL5 475 aaPredicted RBP9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 FAM234AQ9H0X4 552 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 MUC13Q9H3R2 512 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 RAB18Q9NP72 206 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 C14orf119Q9NWQ9 140 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CMTM6Q9NX76 183 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ZNF222Q9UK12 451 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 TCF19Q9Y242 345 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 N6AMT1Q9Y5N5 214 aa9.57□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DSCAML1Q8TD84 2053 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 IGKV1D-17A0A075B6S4 117 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 A0A1W2PQ09 198 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 UNC119BA6NIH7 251 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 FAM90A8PA6NJQ4 464 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 VGLL3A8MV65 326 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 AKR7A2O43488 359 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ACAA1P09110 424 aaPredicted RBP9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 NDUFB7P17568 137 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 RPS6KA3P51812 740 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 NKAPLQ5M9Q1 402 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 C10orf99Q6UWK7 81 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DRAM2Q6UX65 266 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 PRSS45Q7RTY3 260 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SDR9C7Q8NEX9 313 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OR2AJ1Q8NGZ0 328 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 STON2Q8WXE9 905 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 HSH2DQ96JZ2 352 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 TMEM5Q9Y2B1 443 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 RHBDD3Q9Y3P4 386 aa9.56□□□□□ -0.88
SPTLC1P3-201ENST00000403408 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 hCG_38984A0A1B0GV85 526 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 H0YAE9 185 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DIRAS1O95057 198 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 COX7A1P24310 79 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 NOS3P29474 1203 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DCTDP32321 178 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CAV3P56539 151 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CNN3Q15417 329 aaKnown RBP9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SLC36A3Q495N2 470 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 DNM1P34Q6PK57 102 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SMARCD3Q6STE5 483 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 LIAT1Q6ZQX7 453 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CBLL1Q75N03 491 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 CROCCP2Q86T23 111 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 ZDHHC21Q8IVQ6 265 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 LINC00471Q8N535 108 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OR2T12Q8NG77 320 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 OR8S1Q8NH09 359 aa9.55□□□□□ -0.88
SPTLC1P3-201ENST00000403408 SPTSSAQ969W0 71 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms