RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PGAP1Q75T13 922 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 C1orf147Q96MC9 270 aaPredicted RBP17.53■□□□□ 0.4
CCDC47-202ENST00000403162 SEC11CQ9BY50 192 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 VN1R1Q9GZP7 353 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 MRPS28Q9Y2Q9 187 aaKnown RBP17.53■□□□□ 0.4
CCDC47-202ENST00000403162 FLVCR1Q9Y5Y0 555 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 WDR87Q6ZQQ6 2873 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 SNAPINO95295 136 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 CTAG1AP78358 180 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 SRSF3P84103 164 aaKnown RBP17.52■□□□□ 0.4
CCDC47-202ENST00000403162 PLAC9Q5JTB6 97 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 PEG10Q86TG7 708 aaKnown RBP17.52■□□□□ 0.4
CCDC47-202ENST00000403162 CBLN2Q8IUK8 224 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 OR1L3Q8NH93 324 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 NUBPLQ8TB37 319 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 RAB3CQ96E17 227 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 AQP10Q96PS8 301 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 TLNRD1Q9H1K6 362 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 TMEM9BQ9NQ34 198 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 SRPK3Q9UPE1 567 aa17.52■□□□□ 0.4
CCDC47-202ENST00000403162 FPR2P25090 351 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 SUMO3P55854 103 aaPredicted RBP17.52■□□□□ 0.39
CCDC47-202ENST00000403162 MST1LQ2TV78 715 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 GLIPR1L1Q6UWM5 242 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 CLEC18BQ6UXF7 455 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 PRSS58Q8IYP2 241 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 OR5AS1Q8N127 324 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 KCNG3Q8TAE7 436 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 OR51E1Q8TCB6 317 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 DDIT4LQ96D03 193 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 SCGB3A2Q96PL1 93 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 ADAT1Q9BUB4 502 aaKnown RBP17.52■□□□□ 0.39
CCDC47-202ENST00000403162 SEC16AO15027 2179 aa17.52■□□□□ 0.39
CCDC47-202ENST00000403162 EXPH5Q8NEV8 1989 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 A0A1W2PQM1 296 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 CDC14BO60729 498 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 CD59P13987 128 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 LAP3P28838 519 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 ARL4DP49703 201 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 HSD11B2P80365 405 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 PJVKQ0ZLH3 352 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 TMEM104Q8NE00 496 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 C5orf34Q96MH7 638 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 OCSTAMPQ9BR26 566 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 PARD6AQ9NPB6 346 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 LPAR3Q9UBY5 353 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 UNC13CQ8NB66 2214 aa17.51■□□□□ 0.39
CCDC47-202ENST00000403162 A0A1W2PNV4 684 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 MSGN1A6NI15 193 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 SOCS1O15524 211 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 MTRF1O75570 445 aaKnown RBP17.5■□□□□ 0.39
CCDC47-202ENST00000403162 NBL1P41271 181 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 NPY4RP50391 375 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 BIDP55957 195 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 C17orf67Q0P5P2 114 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 RNF144BQ7Z419 303 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 ROBO4Q8WZ75 1007 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 MRPL13Q9BYD1 178 aaKnown RBP17.5■□□□□ 0.39
CCDC47-202ENST00000403162 UQCC1Q9NVA1 299 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 ALKBH4Q9NXW9 302 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 B3GALT5Q9Y2C3 310 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 LIPT2A6NK58 231 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 MPIG6BO95866 241 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 RFC3P40938 356 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 RAB13P51153 203 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 SUPT4H1P63272 117 aaKnown RBP17.5■□□□□ 0.39
CCDC47-202ENST00000403162 RNF4P78317 190 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 FAM189A2Q15884 450 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 LANCL3Q6ZV70 420 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 TMPRSS9Q7Z410 1059 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 CARFQ8N187 725 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 ADAMTS17Q8TE56 1095 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 SAT2Q96F10 170 aaPredicted RBP17.5■□□□□ 0.39
CCDC47-202ENST00000403162 TMEM41AQ96HV5 264 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 TREM1Q9NP99 234 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 OR5AC2Q9NZP5 309 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 DNAJB11Q9UBS4 358 aa17.5■□□□□ 0.39
CCDC47-202ENST00000403162 ZNF98A6NK75 572 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 ZNF705EA8MWA4 302 aaPredicted RBP17.49■□□□□ 0.39
CCDC47-202ENST00000403162 ZNF878C9JN71 531 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 ADAP1O75689 374 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 CBX5P45973 191 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 TMEM50BP56557 158 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 SLC9A3R2Q15599 337 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 THEM4Q5T1C6 240 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 ZNF585AQ6P3V2 769 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 LHFPL1Q86WI0 220 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 SPACA5Q96QH8 159 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 EMC6Q9BV81 110 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 TMEM59Q9BXS4 323 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 SERINC1Q9NRX5 453 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 RPH3AQ9Y2J0 694 aaPredicted RBP17.49■□□□□ 0.39
CCDC47-202ENST00000403162 LHFPL6Q9Y693 200 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 CUL9Q8IWT3 2517 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 PCP4L1A6NKN8 68 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 MFNGO00587 321 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 LRP3O75074 770 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 HEXAP06865 529 aa17.49■□□□□ 0.39
CCDC47-202ENST00000403162 ZNF574Q6ZN55 896 aaPredicted RBP17.49■□□□□ 0.39
CCDC47-202ENST00000403162 OR56B1Q8NGI3 324 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms