RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 IAH1Q2TAA2 248 aaPredicted RBP11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 PLAC9Q5JTB6 97 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 COL13A1Q5TAT6 717 aaPredicted RBP11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 H3F3CQ6NXT2 135 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 SLC25A42Q86VD7 318 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 NAXDQ8IW45 347 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 KCNRGQ8N5I3 272 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 SLC22A8Q8TCC7 542 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 ZNF285Q96NJ3 590 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 OCIAD1Q9NX40 245 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 CYB5R1Q9UHQ9 305 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 PCDHGA1Q9Y5H4 931 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 SHANK1Q9Y566 2161 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 ZNF407Q9C0G0 2248 aa11.2□□□□□ -0.62
PPP4R1-202ENST00000400555 MSGN1A6NI15 193 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 MED6O75586 246 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 RAD51DO75771 328 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 ABCA11PQ4W5N1 156 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 THEM4Q5T1C6 240 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 CLEC18BQ6UXF7 455 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 ZNF385AQ96PM9 386 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 LPAR5Q9H1C0 372 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 OR51B6Q9H340 312 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 OR5AC2Q9NZP5 309 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 NXT1Q9UKK6 140 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 CDC14BO60729 498 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 DIRAS3O95661 229 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 IGFBP3P17936 291 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 ACY1Q03154 408 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 SMAD4Q13485 552 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 SMCO1Q147U7 214 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 KISS1Q15726 138 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 PCK2Q16822 640 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 FAM122CQ6P4D5 195 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 MEX3BQ6ZN04 569 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 ULBP2Q9BZM5 246 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 SLC25A32Q9H2D1 315 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 RASL12Q9NYN1 266 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 WIF1Q9Y5W5 379 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 MTCH2Q9Y6C9 303 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 RNF222A6NCQ9 220 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 TNFSF12O43508 249 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 XRCC2O43543 280 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 AQP8O94778 261 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 HIST1H1DP16402 221 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 RCC1P18754 421 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 CSRP1P21291 193 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 PPIAP62937 165 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 SRSF3P84103 164 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 RSU1Q15404 277 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 MPPED2Q15777 294 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 FAM166AQ6J272 317 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 FDX2Q6P4F2 183 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 PLXDC2Q6UX71 529 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 NOXO1Q8NFA2 376 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 C20orf24Q9BUV8 137 aa11.19□□□□□ -0.62
PPP4R1-202ENST00000400555 TMEM200CA6NKL6 621 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 OR6C76A6NM76 312 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 SSX5O60225 188 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 BPNT1O95861 308 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 FGF2P09038 288 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 OTX2P32243 289 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 GALNSP34059 522 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 PDSS1Q5T2R2 415 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 ZNF574Q6ZN55 896 aaPredicted RBP11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 OR56B1Q8NGI3 324 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 STOML3Q8TAV4 291 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 AQP3Q92482 292 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 HSPB2A8KAH6 182 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 SIGLEC6O43699 453 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 KLK3P07288 261 aaPredicted RBP11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 IFI6P09912 130 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 SCAND1P57086 179 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 HSPB2Q16082 182 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 BAP18Q8IXM2 172 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 SPAG16Q8N0X2 631 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 AKR7LQ8NHP1 331 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 NUBPLQ8TB37 319 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 MITD1Q8WV92 249 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 ALKBH3Q96Q83 286 aaPredicted RBP11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 RASL10BQ96S79 203 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 ZNF2Q9BSG1 426 aaPredicted RBP11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 SHARPINQ9H0F6 387 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 PARPBPQ9NWS1 579 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 TP53I11O14683 189 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 LRP3O75074 770 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 CRHP06850 196 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 CXCL12P48061 93 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 SPIN3Q5JUX0 258 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 C1orf100Q5SVJ3 147 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 DRAM2Q6UX65 266 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 SUMF1Q8NBK3 374 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 LHFPL5Q8TAF8 219 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 ARL11Q969Q4 196 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 REEP6Q96HR9 211 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 NECAB3Q96P71 396 aaPredicted RBP11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 FAAP24Q9BTP7 215 aa11.18□□□□□ -0.62
PPP4R1-202ENST00000400555 A0A0A6YYD4 124 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms