RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 TEX261Q6UWH6 196 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 LUZP2Q86TE4 346 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 CLRN3Q8NCR9 226 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 GCDHQ92947 438 aaPredicted RBP13.26□□□□□ -0.29
COL25A1-201ENST00000399126 FGGYQ96C11 551 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 ANAPC16Q96DE5 110 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 ADAT3Q96EY9 351 aaPredicted RBP13.26□□□□□ -0.29
COL25A1-201ENST00000399126 PRRG4Q9BZD6 226 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 GPR35Q9HC97 309 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 SLC7A10Q9NS82 523 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 CGGBP1Q9UFW8 167 aaPredicted RBP13.26□□□□□ -0.29
COL25A1-201ENST00000399126 U3KQ87 197 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 IGKV3D-15A0A087WSY6 115 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 A0A1B0GTI1 187 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 PLA2G10O15496 165 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 SYT7O43581 403 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 MRPL33O75394 65 aaKnown RBP13.26□□□□□ -0.29
COL25A1-201ENST00000399126 TGM6O95932 706 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 TMIGD3P0DMS9 266 aaPredicted RBP13.26□□□□□ -0.29
COL25A1-201ENST00000399126 DCTDP32321 178 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 DMRTC1Q5HYR2 192 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 CLLU1Q5K131 121 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 FAM27BQ5VT28 67 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 SLC22A25Q6T423 547 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 METAP1DQ6UB28 335 aaPredicted RBP13.26□□□□□ -0.29
COL25A1-201ENST00000399126 GJC3Q8NFK1 279 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 WDYHV1Q96HA8 205 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 FOXB1Q99853 325 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 PLEK2Q9NYT0 353 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 MCTS1Q9ULC4 181 aaKnown RBP13.26□□□□□ -0.29
COL25A1-201ENST00000399126 CAMK2AQ9UQM7 478 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 CD2P06729 351 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 IGFBP3P17936 291 aaPredicted RBP13.26□□□□□ -0.29
COL25A1-201ENST00000399126 HLA-DMAP28067 261 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 PITPNBP48739 271 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 RAB13P51153 203 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 SFRP5Q5T4F7 317 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 TMEM244Q5VVB8 128 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 PRSS45Q7RTY3 260 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 ABHD12BQ7Z5M8 362 aaPredicted RBP13.26□□□□□ -0.29
COL25A1-201ENST00000399126 COMMD2Q86X83 199 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 OR5T2Q8NGG2 359 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 OR1J2Q8NGS2 313 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 C11orf54Q9H0W9 315 aaPredicted RBP13.26□□□□□ -0.29
COL25A1-201ENST00000399126 GPR84Q9NQS5 396 aa13.26□□□□□ -0.29
COL25A1-201ENST00000399126 ABCD4O14678 606 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 ATXN7O15265 892 aaPredicted RBP13.25□□□□□ -0.29
COL25A1-201ENST00000399126 WNT5AP41221 380 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 SLC6A9P48067 706 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 HIST1H3AP68431 136 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 SCN1BQ07699 218 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 HIST2H3PS2Q5TEC6 136 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 ZNF774Q6NX45 483 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 HIST2H3AQ71DI3 136 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 AKR7LQ8NHP1 331 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 CPT1CQ8TCG5 803 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 ZFP3Q96NJ6 502 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 KCNJ15Q99712 375 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 ZNF275Q9NSD4 429 aaPredicted RBP13.25□□□□□ -0.29
COL25A1-201ENST00000399126 MSRB2Q9Y3D2 182 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 ACTL6AO96019 429 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 PTHLHP12272 177 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 UBE2NLQ5JXB2 153 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 ELFN2Q5R3F8 820 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 NUFIP2Q7Z417 695 aaKnown RBP13.25□□□□□ -0.29
COL25A1-201ENST00000399126 RNF144BQ7Z419 303 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 OR51D1Q8NGF3 324 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 TMEM45BQ96B21 275 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 FAM71F1Q96KD3 344 aaPredicted RBP13.25□□□□□ -0.29
COL25A1-201ENST00000399126 SLCO5A1Q9H2Y9 848 aa13.25□□□□□ -0.29
COL25A1-201ENST00000399126 A0A0A6YYJ9 748 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 K7EM74 188 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 CEACAM4O75871 244 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 KRT33AO76009 404 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 ABOP16442 354 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 ZNF32P17041 273 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 EFNB2P52799 333 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 HGFACQ04756 655 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 GTF3C1Q12789 2109 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 TRIQKQ629K1 86 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 GLCCI1Q86VQ1 547 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 SLC22A24Q8N4F4 322 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 SYNPRQ8TBG9 265 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 GPR137Q96N19 417 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 EEF1E1O43324 174 aaKnown RBP13.24□□□□□ -0.29
COL25A1-201ENST00000399126 NUP62P37198 522 aaPredicted RBP13.24□□□□□ -0.29
COL25A1-201ENST00000399126 GRB2P62993 217 aaKnown RBP13.24□□□□□ -0.29
COL25A1-201ENST00000399126 BIVMQ86UB2 503 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 SKA3Q8IX90 412 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 OR6M1Q8NGM8 313 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 UBASH3BQ8TF42 649 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 HYLS1Q96M11 299 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 CKLFQ9UBR5 152 aa13.24□□□□□ -0.29
COL25A1-201ENST00000399126 FSTP19883 344 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 PRSS12P56730 875 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 HTD2P86397 168 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 DGCR2P98153 550 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 RIPPLY2Q5TAB7 128 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 LYZL4Q96KX0 146 aa13.23□□□□□ -0.29
COL25A1-201ENST00000399126 SCNM1Q9BWG6 230 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms