RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 MPIG6BO95866 241 aa22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 PATE4P0C8F1 98 aa22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 CXCL3P19876 107 aa22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 ANXA7P20073 488 aaKnown RBP22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 ALDH3B1P43353 468 aa22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 SF3B4Q15427 424 aaKnown RBP eCLIP22.5■■□□□ 1.193e-6■□□□□ 8.9
SHARPIN-202ENST00000398712 FJX1Q86VR8 437 aa22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 CMBLQ96DG6 245 aa22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 RANBP3Q9H6Z4 567 aaPredicted RBP22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 ZNF552Q9H707 407 aaPredicted RBP22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 SLC7A10Q9NS82 523 aa22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 UPB1Q9UBR1 384 aa22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 ELF5Q9UKW6 265 aaPredicted RBP22.5■■□□□ 1.19
SHARPIN-202ENST00000398712 SMLR1H3BR10 107 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 PYCARD-AS1I3L0S3 204 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 CREBL2O60519 120 aaPredicted RBP22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 IGHV3-9P01782 118 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 CD74P04233 296 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 FCER2P06734 321 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 ZNF24P17028 368 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 UBE2V2Q15819 145 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 TRAPPC6BQ86SZ2 158 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 MCEMP1Q8IX19 187 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 SEC22CQ9BRL7 303 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 TMEM246Q9BRR3 403 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 URM1Q9BTM9 101 aaKnown RBP22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 CST11Q9H112 138 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 RGCCQ9H4X1 137 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 LDAHQ9H6V9 325 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 NPDC1Q9NQX5 325 aaPredicted RBP22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 PTTG3PQ9NZH4 202 aa22.49■■□□□ 1.19
SHARPIN-202ENST00000398712 MMP7P09237 267 aaPredicted RBP22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 CPN1P15169 458 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 PTGFRP43088 359 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 HGFACQ04756 655 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 ASCC1Q8N9N2 400 aaKnown RBP22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 FGFBP3Q8TAT2 258 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 MS4A3Q96HJ5 214 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 IRF2BPLQ9H1B7 796 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 ATPIF1Q9UII2 106 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 BOLA1Q9Y3E2 137 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 ARF1P84077 181 aaKnown RBP22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 RIPPLY1Q0D2K3 151 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 MEF2DQ14814 521 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 ZNF626Q68DY1 528 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 TMEM104Q8NE00 496 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 APH1AQ96BI3 265 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 SELENOIQ9C0D9 397 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 PLSCR3Q9NRY6 295 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 ZNF69Q9UC07 566 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 LIPGQ9Y5X9 500 aa22.48■■□□□ 1.19
SHARPIN-202ENST00000398712 NKX2-8O15522 239 aa22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 CRTAPO75718 401 aaPredicted RBP22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 RLN1P04808 185 aa22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 GSTP1P09211 210 aaKnown RBP22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 FCGR2AP12318 317 aa22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 OR56B1Q8NGI3 324 aa22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 OR2AE1Q8NHA4 323 aa22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 NPRL2Q8WTW4 380 aa22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 NICN1Q9BSH3 213 aa22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 SLA2Q9H6Q3 261 aa22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 SCP2D1Q9UJQ7 156 aa22.47■■□□□ 1.19
SHARPIN-202ENST00000398712 TRGV5A0A0B4J1U4 118 aa22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 AMY2AP04746 511 aa22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 NAT2P11245 290 aa22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 GNB3P16520 340 aa22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 PLXDC2Q6UX71 529 aa22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 CPNE2Q96FN4 548 aaPredicted RBP22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 S100A13Q99584 98 aa22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 SLC25A21Q9BQT8 299 aaPredicted RBP22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 DEFB127Q9H1M4 99 aa22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 IFT46Q9NQC8 304 aa22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 NPTNQ9Y639 398 aa22.46■■□□□ 1.19
SHARPIN-202ENST00000398712 M0QYG6 137 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 NBL1P41271 181 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 TNFSF10P50591 281 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 SLC22A6Q4U2R8 563 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 PABPC1L2AQ5JQF8 200 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 SEZ6L2Q6UXD5 910 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 SLC36A1Q7Z2H8 476 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 SPICQ8N5J4 248 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 TNFAIP8L1Q8WVP5 186 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 SPSB1Q96BD6 273 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 RAB3CQ96E17 227 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 ZNF436Q9C0F3 470 aaPredicted RBP22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 TINAGL1Q9GZM7 467 aaPredicted RBP22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 BANF2Q9H503 90 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 FAM86C1Q9NVL1 165 aa22.45■■□□□ 1.19
SHARPIN-202ENST00000398712 A0A0A6YYD4 124 aa22.45■■□□□ 1.18
SHARPIN-202ENST00000398712 DISC1C4P0D8 188 aa22.45■■□□□ 1.18
SHARPIN-202ENST00000398712 ZP1P60852 638 aa22.45■■□□□ 1.18
SHARPIN-202ENST00000398712 CNN3Q15417 329 aaKnown RBP22.45■■□□□ 1.18
SHARPIN-202ENST00000398712 C3AR1Q16581 482 aa22.45■■□□□ 1.18
SHARPIN-202ENST00000398712 CRIP3Q6Q6R5 217 aa22.45■■□□□ 1.18
SHARPIN-202ENST00000398712 NUDCD2Q8WVJ2 157 aa22.45■■□□□ 1.18
SHARPIN-202ENST00000398712 ZDHHC11Q9H8X9 412 aa22.45■■□□□ 1.18
SHARPIN-202ENST00000398712 FREM2Q5SZK8 3169 aa22.44■■□□□ 1.18
SHARPIN-202ENST00000398712 UBE2QL1A1L167 161 aa22.44■■□□□ 1.18
SHARPIN-202ENST00000398712 ACKR3P25106 362 aa22.44■■□□□ 1.18
SHARPIN-202ENST00000398712 GNG2P59768 71 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms