RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 PLCXD1Q9NUJ7 323 aa13.31□□□□□ -0.28
MBD1-207ENST00000398488 FKBP14Q9NWM8 211 aa13.31□□□□□ -0.28
MBD1-207ENST00000398488 YLPM1P49750 1951 aaKnown RBP13.3□□□□□ -0.28
MBD1-207ENST00000398488 ZNF850A8MQ14 1090 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 C3orf80F5H4A9 247 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 PPIHO43447 177 aaKnown RBP13.3□□□□□ -0.28
MBD1-207ENST00000398488 FAHP16930 419 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 TNFSF4P23510 183 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 CFL1P23528 166 aaKnown RBP13.3□□□□□ -0.28
MBD1-207ENST00000398488 C21orf33P30042 268 aaPredicted RBP13.3□□□□□ -0.28
MBD1-207ENST00000398488 CD200P41217 278 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 GTF2A1P52655 376 aaPredicted RBP13.3□□□□□ -0.28
MBD1-207ENST00000398488 ST3GAL4Q11206 333 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 FAM201AQ5SY85 155 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 FDX2Q6P4F2 183 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 Q6ZSR3 168 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 COMMD2Q86X83 199 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 OR10AC1Q8NH08 325 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 VCX3BQ9H321 246 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 NARFLQ9H6Q4 476 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 MOB1AQ9H8S9 216 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 INPP5EQ9NRR6 644 aa13.3□□□□□ -0.28
MBD1-207ENST00000398488 PAK1IP1Q9NWT1 392 aaPredicted RBP13.3□□□□□ -0.28
MBD1-207ENST00000398488 DIMT1Q9UNQ2 313 aaKnown RBP13.3□□□□□ -0.28
MBD1-207ENST00000398488 ANKRD30BLA7E2S9 258 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 GMDSO60547 372 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 LY6G6DO95868 133 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 CYB5R3P00387 301 aaPredicted RBP13.29□□□□□ -0.28
MBD1-207ENST00000398488 LALBAP00709 142 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 CST4P01036 141 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 CCL1P22362 96 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 USF1P22415 310 aaPredicted RBP13.29□□□□□ -0.28
MBD1-207ENST00000398488 DCKP27707 260 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 GPR6P46095 362 aaPredicted RBP13.29□□□□□ -0.28
MBD1-207ENST00000398488 TMEM33P57088 247 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 LOXL1Q08397 574 aaPredicted RBP13.29□□□□□ -0.28
MBD1-207ENST00000398488 PRDX4Q13162 271 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 HFEQ30201 348 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 ZNF826PQ6ZT77 177 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 AHSA2Q719I0 299 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 KRT74Q7RTS7 529 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 FAM220AQ7Z4H9 259 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 KCTD20Q7Z5Y7 419 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 C11orf53Q8IXP5 236 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 SYS1Q8N2H4 156 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 HPSE2Q8WWQ2 592 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 PIGCQ92535 297 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 ITPKCQ96DU7 683 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 TMEM80Q96HE8 168 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 PAPOLGQ9BWT3 736 aaKnown RBP13.29□□□□□ -0.28
MBD1-207ENST00000398488 TMEM106BQ9NUM4 274 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 UFSP2Q9NUQ7 469 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 PPP1R3CQ9UQK1 317 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 WIPI2Q9Y4P8 454 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 SIRT4Q9Y6E7 314 aaPredicted RBP13.29□□□□□ -0.28
MBD1-207ENST00000398488 V9GYS6 101 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 CSPG4Q6UVK1 2322 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 OR4C45A6NMZ5 311 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 SLC1A7O00341 560 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 DHRS3O75911 302 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 ZNF205O95201 554 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 PTBP3O95758 552 aaKnown RBP13.29□□□□□ -0.28
MBD1-207ENST00000398488 TACSTD2P09758 323 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 PIPP12273 146 aaPredicted RBP13.29□□□□□ -0.28
MBD1-207ENST00000398488 FOSL1P15407 271 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 THBS2P35442 1172 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 MAP2K3P46734 347 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 SRP9P49458 86 aaKnown RBP13.29□□□□□ -0.28
MBD1-207ENST00000398488 ACTA2P62736 377 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 ACTG2P63267 376 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 Q71RC1 249 aaPredicted RBP13.29□□□□□ -0.28
MBD1-207ENST00000398488 ZNF485Q8NCK3 441 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 CSNK2A3Q8NEV1 391 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 SEMA6DQ8NFY4 1073 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 ZNF391Q9UJN7 358 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 PIGLQ9Y2B2 252 aa13.29□□□□□ -0.28
MBD1-207ENST00000398488 ABCA2Q9BZC7 2435 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 GRPP07492 148 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 HTR1AP08908 422 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 TNFRSF1AP19438 455 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 GATA4P43694 442 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 CEP78Q5JTW2 689 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 C19orf18Q8NEA5 215 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 OR51A4Q8NGJ6 313 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 CLDND2Q8NHS1 167 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 OR5P3Q8WZ94 311 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 CNBD2Q96M20 576 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 SLC22A4Q9H015 551 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 UBAP1Q9NZ09 502 aa13.28□□□□□ -0.28
MBD1-207ENST00000398488 CNOT2Q9NZN8 540 aaKnown RBP13.28□□□□□ -0.28
MBD1-207ENST00000398488 ZNF816-ZNF321PA0A0X1KG74 233 aa13.27□□□□□ -0.29
MBD1-207ENST00000398488 LOC107986453A0A1B0GWG9 222 aa13.27□□□□□ -0.29
MBD1-207ENST00000398488 EFCAB10A6NFE3 127 aa13.27□□□□□ -0.29
MBD1-207ENST00000398488 CLDN25C9JDP6 229 aa13.27□□□□□ -0.29
MBD1-207ENST00000398488 TMEM178BH3BS89 294 aa13.27□□□□□ -0.29
MBD1-207ENST00000398488 CSNK2BP67870 215 aa13.27□□□□□ -0.29
MBD1-207ENST00000398488 RIPPLY1Q0D2K3 151 aa13.27□□□□□ -0.29
MBD1-207ENST00000398488 ALKBH1Q13686 389 aaKnown RBP13.27□□□□□ -0.29
MBD1-207ENST00000398488 TMEM249Q2WGJ8 235 aa13.27□□□□□ -0.29
MBD1-207ENST00000398488 KLBQ86Z14 1044 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms