RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ZNF850A8MQ14 1090 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 TP53I11O14683 189 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 IFNA21P01568 189 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 SPP1P10451 314 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 MST1P26927 711 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 TAS2R31P59538 309 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 HES3Q5TGS1 186 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 LHFPL4Q7Z7J7 247 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 C12orf10Q9HB07 376 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 GPR160Q9UJ42 338 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 NAV3Q8IVL0 2385 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 A0A1W2PQD3 144 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 SIGLEC6O43699 453 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 SPINK2P20155 84 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 MC2RQ01718 297 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 WDR74Q6RFH5 385 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-202ENST00000398417 ST8SIA2Q92186 375 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 HEXA-AS1Q9H8Q6 139 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 PIPOXQ9P0Z9 390 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 HRH3Q9Y5N1 445 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 WIF1Q9Y5W5 379 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 B4E171 279 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 TTRP02766 147 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 VSIG8P0DPA2 414 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 RPA2P15927 270 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 CD1BP29016 333 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 BLVRBP30043 206 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-202ENST00000398417 PPP1R1AQ13522 171 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 MEF2DQ14814 521 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 OR14L1PQ8NHC6 308 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 GPX7Q96SL4 187 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-202ENST00000398417 PRRT1Q99946 306 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF426Q9BUY5 554 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 C1orf198Q9H425 327 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 MEMO1Q9Y316 297 aa4.4□□□□□ -1.71
SMAD4-202ENST00000398417 LOC285556D6RIA3 1793 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 A0A0D9SG52 128 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 SPRY1O43609 319 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 TSPAN2O60636 221 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 OR2J2O76002 312 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 IGHG1P01857 330 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 APOC1P02654 83 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 APOBEC1P41238 236 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 GABRA4P48169 554 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 AIMP2Q13155 320 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ISXQ2M1V0 245 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 RGS7BPQ6MZT1 257 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 HAGHLQ6PII5 290 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 CPEB2Q7Z5Q1 589 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 PNLDC1Q8NA58 520 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 OR14K1Q8NGZ2 314 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 GPX8Q8TED1 209 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 KCNE4Q8WWG9 221 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ASB10Q8WXI3 467 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 OCIAD1Q9NX40 245 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ATAD5Q96QE3 1844 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 TRAV34A0A0B4J273 112 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 SOCS1O15524 211 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ZFAND5O76080 213 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 FARS2O95363 451 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 DDAH2O95865 285 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 GNRHRP30968 328 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ATP1B3P54709 279 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 C17orf67Q0P5P2 114 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF266Q14584 549 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 LYG2Q86SG7 212 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 INO80EQ8NBZ0 244 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 RAB3CQ96E17 227 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 HRH4Q9H3N8 390 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 FAM206AQ9NX38 181 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 PLEK2Q9NYT0 353 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 EHFQ9NZC4 300 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 A0A1W2PRV1 198 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ATP6V1G2-DDX39BF2Z307 99 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 MBTPS2O43462 519 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 LCATP04180 440 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 GAAP10253 952 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 RAC2P15153 192 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 BAMBIQ13145 260 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF260Q3ZCT1 412 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF684Q5T5D7 378 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 GUSBP11Q6P575 273 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 SYT13Q7L8C5 426 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ZSCAN1Q8NBB4 408 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ADAD2Q8NCV1 583 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 OR5D14Q8NGL3 314 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 AKR7LQ8NHP1 331 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ASB5Q8WWX0 329 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 TTC9Q92623 222 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 PARP12Q9H0J9 701 aaKnown RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 METTL9Q9H1A3 318 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 OR6C76A6NM76 312 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 F8W036 122 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ADAP1O75689 374 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 PATE4P0C8F1 98 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF93P35789 620 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-202ENST00000398417 NPBWR1P48145 328 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 BLOC1S1P78537 153 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 PDSS1Q5T2R2 415 aa4.39□□□□□ -1.71
SMAD4-202ENST00000398417 OGFOD3Q6PK18 319 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms