RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 E9PQ18 207 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 H0YAE9 185 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 KHDRBS3O75525 346 aaKnown RBP13.32□□□□□ -0.28
CUX2-202ENST00000397643 PRR23D2P0DMB1 279 aaPredicted RBP13.32□□□□□ -0.28
CUX2-202ENST00000397643 CAPGP40121 348 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 IER3P46695 156 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 AQP4P55087 323 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 MAB21L1Q13394 359 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 KPRPQ5T749 579 aaPredicted RBP13.32□□□□□ -0.28
CUX2-202ENST00000397643 IZUMO2Q6UXV1 221 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 ZSCAN4Q8NAM6 433 aaPredicted RBP13.32□□□□□ -0.28
CUX2-202ENST00000397643 CYB561A3Q8NBI2 242 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 BHLHE23Q8NDY6 225 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 OR2T4Q8NH00 348 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 OR1F12Q8NHA8 337 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 FAM81AQ8TBF8 368 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 TBC1D15Q8TC07 691 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 TRUB1Q8WWH5 349 aaKnown RBP13.32□□□□□ -0.28
CUX2-202ENST00000397643 OTULINQ96BN8 352 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 ZNF582Q96NG8 517 aaPredicted RBP13.32□□□□□ -0.28
CUX2-202ENST00000397643 APOL4Q9BPW4 351 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 ADI1Q9BV57 179 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 FN3KQ9H479 309 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 RERGLQ9H628 205 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 RPRD1BQ9NQG5 326 aaKnown RBP13.32□□□□□ -0.28
CUX2-202ENST00000397643 ATPIF1Q9UII2 106 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 IGHV1-69DA0A0B4J2H0 117 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 A0A0U1RQK1 487 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 G3V4G9 280 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 RER1O15258 196 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 PRKYO43930 277 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 SLC16A7O60669 478 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 FCN3O75636 299 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 TOX4O94842 621 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 ALX3O95076 343 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 IGHV1-69P01742 117 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 HLA-DPB1P04440 258 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 RGS6P49758 472 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 SLC25A1P53007 311 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 PRSS12P56730 875 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 ADARB1P78563 741 aaKnown RBP13.31□□□□□ -0.28
CUX2-202ENST00000397643 C2orf68Q2NKX9 166 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 Q6ZPA2 131 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 TCEANCQ8N8B7 351 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 OR8J1Q8NGP2 316 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 TMEM163Q8TC26 289 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 WDFY2Q96P53 400 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 DDOQ99489 341 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 NUAK2Q9H093 628 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 SIRPDQ9H106 197 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 C16orf95Q9H693 158 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 SMURF1Q9HCE7 757 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 SRA1Q9HD15 236 aaKnown RBP13.31□□□□□ -0.28
CUX2-202ENST00000397643 B9D1Q9UPM9 204 aa13.31□□□□□ -0.28
CUX2-202ENST00000397643 C5orf63A6NC05 138 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 MPZL2O60487 215 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 FAM20BO75063 409 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 CENPAP49450 140 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 NPY4RP50391 375 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 LSM6P62312 80 aaKnown RBP13.3□□□□□ -0.28
CUX2-202ENST00000397643 IL18R1Q13478 541 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 PLBD1Q6P4A8 553 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 CPOQ8IVL8 374 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 SETD9Q8NE22 299 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 PROKR2Q8NFJ6 384 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 OR9Q1Q8NGQ5 310 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 TFAP2CQ92754 450 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 APOBEC3DQ96AK3 386 aaPredicted RBP13.3□□□□□ -0.28
CUX2-202ENST00000397643 TECTBQ96PL2 329 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 IL4I1Q96RQ9 567 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 NMNAT2Q9BZQ4 307 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 WDR76Q9H967 626 aa13.3□□□□□ -0.28
CUX2-202ENST00000397643 H2AFY2Q9P0M6 372 aaPredicted RBP13.3□□□□□ -0.28
CUX2-202ENST00000397643 NOTCH3Q9UM47 2321 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 FAM183AA6NL82 134 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 M0R129 80 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 LIPFP07098 398 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 SPI1P17947 270 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 CD200P41217 278 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 EFNB1P98172 346 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 MPPED2Q15777 294 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 RSPO1Q2MKA7 263 aaPredicted RBP13.29□□□□□ -0.28
CUX2-202ENST00000397643 SAMD5Q5TGI4 173 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 PRAMEF6Q5VXH4 476 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 COLCA1Q6ZS62 124 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 ZBTB46Q86UZ6 589 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 GLB1L2Q8IW92 636 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 OR6V1Q8N148 313 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 CELF2-AS1Q8N7Q2 184 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 OR5L1Q8NGL2 311 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 LHX4Q969G2 390 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 TSSK2Q96PF2 358 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 OR51V1Q9H2C8 321 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 MED20Q9H944 212 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 TMEM100Q9NV29 134 aa13.29□□□□□ -0.28
CUX2-202ENST00000397643 COA3Q9Y2R0 106 aaPredicted RBP13.29□□□□□ -0.28
CUX2-202ENST00000397643 TET2Q6N021 2002 aaPredicted RBP13.29□□□□□ -0.28
CUX2-202ENST00000397643 PLXNB1O43157 2135 aa13.28□□□□□ -0.28
CUX2-202ENST00000397643 IGLV1-36A0A0B4J1U3 117 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms