RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 B9D1Q9UPM9 204 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 SF3B6Q9Y3B4 125 aaKnown RBP7.63□□□□□ -1.19
NEDD9-203ENST00000397378 IER3IP1Q9Y5U9 82 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 DSCAML1Q8TD84 2053 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 ACOT8O14734 319 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 CHST1O43916 411 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 TIPRLO75663 272 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 NPPAP01160 153 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 FAHP16930 419 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 DDOSTP39656 456 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 NAA10P41227 235 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-203ENST00000397378 RPS6KA3P51812 740 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 FXYD6P3P58550 94 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 HABP2Q14520 560 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-203ENST00000397378 GLYATL3Q5SZD4 288 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 STUMQ69YW2 141 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 HCP5Q6MZN7 132 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 DRAM2Q6UX65 266 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 WDR82Q6UXN9 313 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 DPY19L4Q7Z388 723 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 WDR86Q86TI4 376 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 ZBTB46Q86UZ6 589 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 OR56B2PQ8NGI1 322 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 OR5D13Q8NGL4 314 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 PIFOQ8TCI5 191 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 C17orf50Q8WW18 174 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 H1FXQ92522 213 aaKnown RBP7.62□□□□□ -1.19
NEDD9-203ENST00000397378 RORBQ92753 470 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 SPTSSAQ969W0 71 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 OR5M11Q96RB7 305 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 CDCA4Q9BXL8 241 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 ZNF702PQ9H963 129 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 SRA1Q9HD15 236 aaKnown RBP7.62□□□□□ -1.19
NEDD9-203ENST00000397378 KCNG2Q9UJ96 466 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 RAB21Q9UL25 225 aa7.62□□□□□ -1.19
NEDD9-203ENST00000397378 FAM220BPB1ANY3 271 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 CLIC3O95833 236 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 CCDC159P0C7I6 412 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 SELLP14151 372 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 ANOS1P23352 680 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 GSK3BP49841 420 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 CAV3P56539 151 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 IKZF1Q13422 519 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 BLMHQ13867 455 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 COQ5Q5HYK3 327 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 ZNF788Q6ZQV5 615 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 VTCN1Q7Z7D3 282 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 OR1M1Q8NGA1 313 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 OR9Q1Q8NGQ5 310 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 OR8S1Q8NH09 359 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 SPSB4Q96A44 273 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 SEH1LQ96EE3 360 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 MED30Q96HR3 178 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 FAM46AQ96IP4 442 aaKnown RBP7.61□□□□□ -1.19
NEDD9-203ENST00000397378 RSRC1Q96IZ7 334 aaKnown RBP7.61□□□□□ -1.19
NEDD9-203ENST00000397378 RCHY1Q96PM5 261 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 WNT10AQ9GZT5 417 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 TLNRD1Q9H1K6 362 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 TMBIM4Q9HC24 238 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 HAO2Q9NYQ3 351 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 ADA2Q9NZK5 511 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.61□□□□□ -1.19
NEDD9-203ENST00000397378 CAPN7Q9Y6W3 813 aa7.61□□□□□ -1.19
NEDD9-203ENST00000397378 V9GYY5 206 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-203ENST00000397378 DNAH7Q8WXX0 4024 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 A0A1W2PQ09 198 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 NKX6-3A6NJ46 265 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 ANKRD30BLA7E2S9 258 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 ARPC3O15145 178 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 XRCC2O43543 280 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 RENP00797 406 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 PAICSP22234 425 aaKnown RBP7.6□□□□□ -1.19
NEDD9-203ENST00000397378 NOS3P29474 1203 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 OMPP47874 163 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 CSNK2BP67870 215 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 GABPB1Q06547 395 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-203ENST00000397378 DGUOKQ16854 277 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 IFI44LQ53G44 452 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 ARSJQ5FYB0 599 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-203ENST00000397378 METTL21CQ5VZV1 264 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 SMARCD3Q6STE5 483 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 CYB561A3Q8NBI2 242 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 OR2T12Q8NG77 320 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 OR5T2Q8NGG2 359 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 OR10Z1Q8NGY1 313 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 DUS3LQ96G46 650 aaKnown RBP7.6□□□□□ -1.19
NEDD9-203ENST00000397378 ERMAPQ96PL5 475 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-203ENST00000397378 RAB3IPQ96QF0 476 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-203ENST00000397378 NMNAT3Q96T66 252 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 DDOQ99489 341 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 INPP5EQ9NRR6 644 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 MRPL22Q9NWU5 206 aaKnown RBP7.6□□□□□ -1.19
NEDD9-203ENST00000397378 SLC25A10Q9UBX3 287 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-203ENST00000397378 HERC2O95714 4834 aa7.6□□□□□ -1.19
NEDD9-203ENST00000397378 TRBV23-1A0A0A0MS06 115 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 A0A1W2PRQ8 180 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 CDIPTO14735 213 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 SIGLEC5O15389 551 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 JTBO76095 146 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 HLA-DQA2P01906 255 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms