RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SFT2D1Q8WV19 159 aa12.29□□□□□ -0.44
NUP98-204ENST00000397004 CD207Q9UJ71 328 aa12.29□□□□□ -0.44
NUP98-204ENST00000397004 RER1O15258 196 aa12.29□□□□□ -0.44
NUP98-204ENST00000397004 IFNA6P05013 189 aa12.29□□□□□ -0.44
NUP98-204ENST00000397004 HEXAP06865 529 aa12.29□□□□□ -0.44
NUP98-204ENST00000397004 F2RL1P55085 397 aa12.29□□□□□ -0.44
NUP98-204ENST00000397004 DEGS2Q6QHC5 323 aa12.29□□□□□ -0.44
NUP98-204ENST00000397004 BTNL8Q6UX41 500 aa12.29□□□□□ -0.44
NUP98-204ENST00000397004 NAA11Q9BSU3 229 aaPredicted RBP12.29□□□□□ -0.44
NUP98-204ENST00000397004 SRPK3Q9UPE1 567 aa12.29□□□□□ -0.44
NUP98-204ENST00000397004 CNTRLQ7Z7A1 2325 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 OR8U9P0C7N5 309 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 HKR1P10072 659 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 FOLR1P15328 257 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 NME2P22392 152 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 MEOX2P50222 304 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 ZP4Q12836 540 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 OR8U1Q8NH10 309 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 RAB3CQ96E17 227 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 C5orf34Q96MH7 638 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 PQLC2LA1A4F0 135 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 ZNF205O95201 554 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 ZNF708P17019 499 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 DEFB133Q30KQ1 61 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 H1FNTQ75WM6 255 aaPredicted RBP12.28□□□□□ -0.44
NUP98-204ENST00000397004 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.28□□□□□ -0.44
NUP98-204ENST00000397004 LIN37Q96GY3 246 aaPredicted RBP12.28□□□□□ -0.44
NUP98-204ENST00000397004 NECAB3Q96P71 396 aaPredicted RBP12.28□□□□□ -0.44
NUP98-204ENST00000397004 CLCC1Q96S66 551 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 MRPS28Q9Y2Q9 187 aaKnown RBP12.28□□□□□ -0.44
NUP98-204ENST00000397004 MMACHCQ9Y4U1 282 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 NPIPA5E9PKD4 350 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 PTGER4P35408 488 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 FOXF1Q12946 379 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 FOXRED2Q8IWF2 684 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 ST6GALNAC5Q9BVH7 336 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 RAB18Q9NP72 206 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 NPIPA1Q9UND3 350 aa12.28□□□□□ -0.44
NUP98-204ENST00000397004 RNASEK-C17orf49H0YIS7 233 aa12.27□□□□□ -0.44
NUP98-204ENST00000397004 HOXB5P09067 269 aa12.27□□□□□ -0.44
NUP98-204ENST00000397004 SNRPEP62304 92 aaKnown RBP12.27□□□□□ -0.44
NUP98-204ENST00000397004 MRPS21P82921 87 aaKnown RBP12.27□□□□□ -0.44
NUP98-204ENST00000397004 OR5D14Q8NGL3 314 aa12.27□□□□□ -0.44
NUP98-204ENST00000397004 TMEM41AQ96HV5 264 aa12.27□□□□□ -0.44
NUP98-204ENST00000397004 IFT22Q9H7X7 185 aa12.27□□□□□ -0.44
NUP98-204ENST00000397004 SERINC1Q9NRX5 453 aa12.27□□□□□ -0.44
NUP98-204ENST00000397004 A0A1W2PPC4 97 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 ZNF44P15621 663 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 CBR1P16152 277 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 DHPSP49366 369 aaPredicted RBP12.27□□□□□ -0.45
NUP98-204ENST00000397004 ACY1Q03154 408 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 CCDC157Q569K6 752 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 TMEM268Q5VZI3 342 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 LYZL4Q96KX0 146 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 OCSTAMPQ9BR26 566 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 CRB3Q9BUF7 120 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 GPR84Q9NQS5 396 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 MMP17Q9ULZ9 603 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 TLCD2A6NGC4 264 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 MASP2O00187 686 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 ZNF121P58317 390 aaPredicted RBP12.27□□□□□ -0.45
NUP98-204ENST00000397004 TLE3Q04726 772 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 MISPQ8IVT2 679 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 APCDD1LQ8NCL9 501 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 LMX1AQ8TE12 382 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 GSKIPQ9P0R6 139 aa12.27□□□□□ -0.45
NUP98-204ENST00000397004 WDFY4Q6ZS81 3184 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 LIPT2A6NK58 231 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 FBXO24O75426 580 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 SNAPINO95295 136 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 CD80P33681 288 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 THBS4P35443 961 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 ABHD12BQ7Z5M8 362 aaPredicted RBP12.26□□□□□ -0.45
NUP98-204ENST00000397004 C17orf82Q86X59 251 aaPredicted RBP12.26□□□□□ -0.45
NUP98-204ENST00000397004 SLC25A43Q8WUT9 341 aaPredicted RBP12.26□□□□□ -0.45
NUP98-204ENST00000397004 KLHDC7BQ96G42 594 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 FAM71F1Q96KD3 344 aaPredicted RBP12.26□□□□□ -0.45
NUP98-204ENST00000397004 HDHD3Q9BSH5 251 aaPredicted RBP12.26□□□□□ -0.45
NUP98-204ENST00000397004 CACFD1Q9UGQ2 172 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 LINC00587B1AMM8 73 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 IL34Q6ZMJ4 242 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 NPRL2Q8WTW4 380 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 ABCA7Q8IZY2 2146 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 TBPP20226 339 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 LTBRP36941 435 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 PPM1FP49593 454 aaPredicted RBP12.26□□□□□ -0.45
NUP98-204ENST00000397004 FHITP49789 147 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 OR1D5P58170 312 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 COL19A1Q14993 1142 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 MFSD8Q8NHS3 518 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 POC1BQ8TC44 478 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 SECTM1Q8WVN6 248 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 ERGIC1Q969X5 290 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 AKR1E2Q96JD6 320 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 IP6K3Q96PC2 410 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 NUDT16L1Q9BRJ7 211 aaKnown RBP12.26□□□□□ -0.45
NUP98-204ENST00000397004 CHST11Q9NPF2 352 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 AMDHD2Q9Y303 409 aa12.26□□□□□ -0.45
NUP98-204ENST00000397004 ASCC3Q8N3C0 2202 aaKnown RBP12.25□□□□□ -0.45
NUP98-204ENST00000397004 DRD1P21728 446 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms