RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ONECUT1Q9UBC0 465 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 LHX3Q9UBR4 397 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ELOA3CA0A087WX78 387 aaPredicted RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 RGS13O14921 159 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 AKR7A3O95154 331 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 DGAT2L7PQ6IED9 249 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 GALNT16Q8N428 558 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 FAM131CQ96AQ9 280 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 SLC5A6Q9Y289 635 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 EXT1Q16394 746 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 C6orf201Q7Z4U5 140 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ING1Q9UK53 422 aaPredicted RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 IGHV3-9P01782 118 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 NANOGP1Q8N7R0 232 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 MARCH1Q8TCQ1 289 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 RDH5Q92781 318 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 NDRG4Q9ULP0 352 aaKnown RBP9.38□□□□□ -0.91
COL4A4-201ENST00000396625 NUMBLQ9Y6R0 609 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 KLRC4-KLRK1H3BQV0 150 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 NUDT3O95989 172 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 PKIAP61925 76 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM178AQ8NBL3 297 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 COA3Q9Y2R0 106 aaPredicted RBP9.38□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM241Q24JQ0 296 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 RBPMS2Q6ZRY4 209 aaKnown RBP9.38□□□□□ -0.91
COL4A4-201ENST00000396625 ZDHHC23Q8IYP9 409 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 LKAAEAR1Q8TD35 194 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 RSRP1Q9BUV0 290 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 C12orf76Q8N812 135 aaPredicted RBP9.38□□□□□ -0.91
COL4A4-201ENST00000396625 EXD3Q8N9H8 876 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 DUSP18Q8NEJ0 188 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 GPA33Q99795 319 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM9BQ9NQ34 198 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 GAMTQ14353 236 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM64Q6YI46 380 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 MARCH3Q86UD3 253 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 OR52N4Q8NGI2 321 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 ATP5SQ99766 215 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 LPAR5Q9H1C0 372 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 C20orf141Q9NUB4 165 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 IGHV3-64DA0A0J9YX35 117 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 RHBDL1O75783 438 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 LSRQ86X29 649 aaPredicted RBP9.38□□□□□ -0.91
COL4A4-201ENST00000396625 CMTM4Q8IZR5 234 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 FAM26EQ8N5C1 309 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 NUP37Q8NFH4 326 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 OR2G2Q8NGZ5 317 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 CSF3RQ99062 836 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM38AQ9H6F2 299 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 PRDM7Q9NQW5 492 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 ANKRD10Q9NXR5 420 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 SLC22A13Q9Y226 551 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 FAM221AA4D161 298 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 PCSK6P29122 969 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 CHRNA7P36544 502 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 CYB561P49447 251 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 TBC1D26Q86UD7 250 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 SCMH1Q96GD3 660 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 ZNF385DQ9H6B1 395 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 FLVCR2Q9UPI3 526 aa9.38□□□□□ -0.91
COL4A4-201ENST00000396625 CYR61O00622 381 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 SMAD6O43541 496 aaKnown RBP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 KLF7O75840 302 aaPredicted RBP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 TSPAN13O95857 204 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 GUSBP08236 651 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 BCL3P20749 454 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 SIX1Q15475 284 aaPredicted RBP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 OR5M1Q8NGP8 315 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 SPACA5Q96QH8 159 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 GPR84Q9NQS5 396 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 ICAM5Q9UMF0 924 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 PRSS21Q9Y6M0 314 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 MAML2Q8IZL2 1156 aaPredicted RBP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 OR6S1Q8NH40 331 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 EDARADDQ8WWZ3 215 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 SRD5A3Q9H8P0 318 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 SEBOXQ9HB31 216 aaPredicted RBP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM140Q9NV12 185 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 H7C2G1 150 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 AP4M1O00189 453 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 SOX15O60248 233 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 JUNBP17275 347 aaPredicted RBP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 RPL27P61353 136 aaKnown RBP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 WDTC1Q8N5D0 677 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 GDE1Q9NZC3 331 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 AMDHD2Q9Y303 409 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 ASTLQ6HA08 431 aaPredicted RBP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 LINC00696Q6ZRV3 163 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 GPR61Q9BZJ8 451 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 DUXBA0A1W2PPF3 345 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM218A2RU14 115 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 M0R1B8 84 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 CST7O76096 145 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 CAMPP49913 170 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 AMMECR1LQ6DCA0 310 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 ACAA1P09110 424 aaPredicted RBP9.37□□□□□ -0.91
COL4A4-201ENST00000396625 EMC4Q5J8M3 183 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 SLC39A11Q8N1S5 342 aa9.37□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms