RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ELF3P78545 371 aaPredicted RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 DEFB112Q30KQ8 113 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 PDLIM3Q53GG5 364 aaPredicted RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 NXNL2Q5VZ03 156 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 OTPQ5XKR4 325 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 CORO6Q6QEF8 472 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 MRPL21Q7Z2W9 205 aaKnown RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 TCEANCQ8N8B7 351 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 PNLDC1Q8NA58 520 aaKnown RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 SPRYD4Q8WW59 207 aaPredicted RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 RFKQ969G6 155 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 HRASLS5Q96KN8 279 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 DMRTB1Q96MA1 342 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 MED20Q9H944 212 aa13.55□□□□□ -0.24
CLTA-203ENST00000396603 MRPL22Q9NWU5 206 aaKnown RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 MRPL15Q9P015 296 aaKnown RBP13.55□□□□□ -0.24
CLTA-203ENST00000396603 IGHV3OR16-10A0A075B7F0 116 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 TRAV38-1A0A0B4J264 116 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 TVP23AA6NH52 213 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 ZNF879B4DU55 563 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 M0R135 149 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 LGALS8O00214 317 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 ZNF593O00488 134 aaPredicted RBP13.54□□□□□ -0.24
CLTA-203ENST00000396603 PRKYO43930 277 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 KNG1P01042 644 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 LCATP04180 440 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 CRYBA1P05813 215 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 CLUP10909 449 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 EPHA2P29317 976 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 PDCD1Q15116 288 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 OR8G1Q15617 311 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 PCK2Q16822 640 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 LINC01590Q5TEZ4 76 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 ERI1Q8IV48 349 aaKnown RBP13.54□□□□□ -0.24
CLTA-203ENST00000396603 ZNF454Q8N9F8 522 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 ZNF555Q8NEP9 628 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 OR6N2Q8NGY6 317 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 SSMEM1Q8WWF3 244 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 WFDC12Q8WWY7 111 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 ZNF799Q96GE5 643 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 TOR3AQ9H497 397 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 WDR76Q9H967 626 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 MARCH7Q9H992 704 aa13.54□□□□□ -0.24
CLTA-203ENST00000396603 SMPD3Q9NY59 655 aaPredicted RBP13.54□□□□□ -0.24
CLTA-203ENST00000396603 FAM181BA6NEQ2 426 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 SNTNA6NMZ2 147 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 CD300LBA8K4G0 201 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 C22orf46C9J442 243 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 MPZL2O60487 215 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 ECDO95905 644 aaPredicted RBP13.53□□□□□ -0.24
CLTA-203ENST00000396603 MMP9P14780 707 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 CFHR2P36980 270 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 SLC15A1P46059 708 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 RAG2P55895 527 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 TMED1Q13445 227 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 APOFQ13790 326 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 TAF13Q15543 124 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 FAM201AQ5SY85 155 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 DRAM2Q6UX65 266 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 LYPD2Q6UXB3 125 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 BRD3OSQ6XYD6 125 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 C17orf107Q6ZR85 190 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 RHOUQ7L0Q8 258 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 LINC00346Q8IVM7 164 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 FAM81AQ8TBF8 368 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 GATAD2BQ8WXI9 593 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 ADAT1Q9BUB4 502 aaKnown RBP13.53□□□□□ -0.24
CLTA-203ENST00000396603 GMPPBQ9Y5P6 360 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 TMEM14AQ9Y6G1 99 aa13.53□□□□□ -0.24
CLTA-203ENST00000396603 ZNF878C9JN71 531 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 TOX4O94842 621 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 APOC1P02654 83 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 POLR2IP36954 125 aaKnown RBP13.52□□□□□ -0.25
CLTA-203ENST00000396603 DDOSTP39656 456 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 EFNB1P98172 346 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 POU4F2Q12837 409 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 MPPED2Q15777 294 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 ZIK1Q3SY52 487 aaPredicted RBP13.52□□□□□ -0.25
CLTA-203ENST00000396603 METTL11BQ5VVY1 283 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 OLFML2AQ68BL7 652 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 MEPCEQ7L2J0 689 aaKnown RBP13.52□□□□□ -0.25
CLTA-203ENST00000396603 DCXRQ7Z4W1 244 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 TIGD4Q8IY51 512 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 TBC1D15Q8TC07 691 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 DYRK2Q92630 601 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 MAP6Q96JE9 813 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 WDFY2Q96P53 400 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 TECTBQ96PL2 329 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 IL4I1Q96RQ9 567 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 MNTQ99583 582 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 TEAD3Q99594 435 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 SLC29A1Q99808 456 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 YIPF3Q9GZM5 350 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 KAAG1Q9UBP8 84 aa13.52□□□□□ -0.25
CLTA-203ENST00000396603 WARS2Q9UGM6 360 aaKnown RBP13.52□□□□□ -0.25
CLTA-203ENST00000396603 CMYA5Q8N3K9 4069 aa13.51□□□□□ -0.25
CLTA-203ENST00000396603 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.51□□□□□ -0.25
CLTA-203ENST00000396603 MDFIC2A0A1B0GVS7 189 aa13.51□□□□□ -0.25
CLTA-203ENST00000396603 CLPSL1A2RUU4 121 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms