RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CD276Q5ZPR3 534 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 LIN54Q6MZP7 749 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 H3F3CQ6NXT2 135 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 SKA3Q8IX90 412 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 OR5AS1Q8N127 324 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 PNLDC1Q8NA58 520 aaKnown RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 SLC6A7Q99884 636 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 TMEM59Q9BXS4 323 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 GPN1Q9HCN4 374 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 UPB1Q9UBR1 384 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 FOXD3Q9UJU5 478 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-203ENST00000394269 KLK13Q9UKR3 277 aa9.76□□□□□ -0.85
TCOF1-203ENST00000394269 IFNA6P05013 189 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 VSIG10L2P0DP72 767 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 MTCP1P56278 107 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 TAS2R19P59542 299 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 C1orf100Q5SVJ3 147 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 PDSS1Q5T2R2 415 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 FAM27BQ5VT28 67 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 BRICD5Q6PL45 260 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 GPX8Q8TED1 209 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 CPNE4Q96A23 557 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 SGK3Q96BR1 496 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 HYLS1Q96M11 299 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 FER1L6-AS2Q96M78 137 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 SLC7A10Q9NS82 523 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF230Q9UIE0 474 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 FAM25EA8MYX2 175 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 SPRY1O43609 319 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 FTH1P19P0C7X4 201 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 SNU13P55769 128 aaKnown RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 ZP1P60852 638 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 PSG4Q00888 419 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 RNASE10Q5GAN6 216 aaKnown RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 C10orf128Q5T292 105 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 OR14K1Q8NGZ2 314 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 CASTOR1Q8WTX7 329 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 RAB3CQ96E17 227 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 OR10A2Q9H208 303 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 POFUT1Q9H488 388 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF703Q9H7S9 590 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 MOB1AQ9H8S9 216 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 TMEM38BQ9NVV0 291 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 RABL2AQ9UBK7 228 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 RABL2BQ9UNT1 228 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 FARS2O95363 451 aaKnown RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 HRH1P35367 487 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 AP2S1P53680 142 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 GFRA1P56159 465 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 TSPAN5P62079 268 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 MRPS34P82930 218 aaKnown RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 NLRC3Q7RTR2 1065 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 OR1F12Q8NHA8 337 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 PIGCQ92535 297 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 REEP6Q96HR9 211 aa9.75□□□□□ -0.85
TCOF1-203ENST00000394269 SF3B5Q9BWJ5 86 aaKnown RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF436Q9C0F3 470 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-203ENST00000394269 CENPEQ02224 2701 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 WIPF3A6NGB9 483 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 GOSR2O14653 212 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 GABRA1P14867 456 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 VAMP1P23763 118 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 ARF1P84077 181 aaKnown RBP9.74□□□□□ -0.85
TCOF1-203ENST00000394269 HGFACQ04756 655 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 FOXC1Q12948 553 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 LRRC37A5PQ49AS3 106 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 GLDNQ6ZMI3 551 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-203ENST00000394269 PGAP1Q75T13 922 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 ZNF100Q8IYN0 542 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 FTMTQ8N4E7 242 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 BHLHE23Q8NDY6 225 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 ZFAND1Q8TCF1 268 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 SNAPC3Q92966 411 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 ARHGAP5-AS1Q96IT6 56 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 RADILQ96JH8 1075 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 CITED4Q96RK1 184 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 GPR35Q9HC97 309 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 MCTS1Q9ULC4 181 aaKnown RBP9.74□□□□□ -0.85
TCOF1-203ENST00000394269 LIPGQ9Y5X9 500 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 PRR14LQ5THK1 2151 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 SPG11Q96JI7 2443 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 DHRS3O75911 302 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 SP1P08047 785 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 AKR1C4P17516 323 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 ACKR3P25106 362 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 BLVRBP30043 206 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-203ENST00000394269 SLC10A1Q14973 349 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 PABPC1L2AQ5JQF8 200 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 ALKBH2Q6NS38 261 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 MUC20Q8N307 709 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-203ENST00000394269 OR10R2Q8NGX6 335 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 KCNK7Q9Y2U2 307 aa9.74□□□□□ -0.85
TCOF1-203ENST00000394269 SDCBPO00560 298 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 TMEM127O75204 238 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 MTRF1O75570 445 aaKnown RBP9.73□□□□□ -0.85
TCOF1-203ENST00000394269 HTR3BO95264 441 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 PI3P19957 117 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 SCAND1P57086 179 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 POU4F3Q15319 338 aa9.73□□□□□ -0.85
TCOF1-203ENST00000394269 KCNMB1Q16558 191 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms