RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ACSM1Q08AH1 577 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 SLC35F1Q5T1Q4 408 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 HCP5Q6MZN7 132 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 C11orf88Q6PI97 169 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 CRIP3Q6Q6R5 217 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 SLC16A9Q7RTY1 509 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 C11orf44Q8N8P7 122 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 CYB561A3Q8NBI2 242 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 PROKR2Q8NFJ6 384 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 OR4C15Q8NGM1 316 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 SLAMF6Q96DU3 332 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 AJUBAQ96IF1 538 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 GAFA1Q96PS6 74 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 KCNJ15Q99712 375 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 HOPXQ9BPY8 73 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-202ENST00000393773 DCAF13Q9NV06 445 aaKnown RBP12.54□□□□□ -0.4
CHMP3-202ENST00000393773 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 M0R1W7 72 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 TFF1P04155 84 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 COX4I1P13073 169 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 MXRA7P84157 204 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 SPIBQ01892 262 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 KLHL12Q53G59 568 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 LRRC10Q5BKY1 277 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 ATPAF1Q5TC12 328 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-202ENST00000393773 NCR3LG1Q68D85 454 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 HACD2Q6Y1H2 254 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 OR4C13Q8NGP0 309 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 MRAPQ8TCY5 172 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 H1FXQ92522 213 aaKnown RBP12.53□□□□□ -0.4
CHMP3-202ENST00000393773 RAB3IPQ96QF0 476 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-202ENST00000393773 DNTTIP1Q9H147 329 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 RANBP3Q9H6Z4 567 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-202ENST00000393773 EGLN3Q9H6Z9 239 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 SAMD4AQ9UPU9 718 aaKnown RBP12.53□□□□□ -0.4
CHMP3-202ENST00000393773 MAB21L2Q9Y586 359 aa12.53□□□□□ -0.4
CHMP3-202ENST00000393773 TENM3Q9P273 2699 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 CDIPTO14735 213 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 GADD45GO95257 159 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 SPARCP09486 303 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 KIR2DS4P43632 304 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 ENTPD1P49961 510 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 KRT72Q14CN4 511 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 DGUOKQ16854 277 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 ZNF788Q6ZQV5 615 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 PRSS45Q7RTY3 260 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 OR5T2Q8NGG2 359 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 OR51L1Q8NGJ5 315 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 OR9Q1Q8NGQ5 310 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 OR2T4Q8NH00 348 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 PPP1R14AQ96A00 147 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 ITPKCQ96DU7 683 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 NSRP1Q9H0G5 558 aaKnown RBP12.52□□□□□ -0.41
CHMP3-202ENST00000393773 WDR13Q9H1Z4 485 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 METTL8Q9H825 291 aaKnown RBP12.52□□□□□ -0.41
CHMP3-202ENST00000393773 HAO2Q9NYQ3 351 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 CDH10Q9Y6N8 788 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 V9GYQ6 96 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 DSCAML1Q8TD84 2053 aa12.52□□□□□ -0.41
CHMP3-202ENST00000393773 NKX6-3A6NJ46 265 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 TBX1O43435 398 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 CHST1O43916 411 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 NAA10P41227 235 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-202ENST00000393773 CX3CR1P49238 355 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 NUDT2P50583 147 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 TSPAN31Q12999 210 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 LY6EQ16553 131 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 TIGD6Q17RP2 521 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 OXLD1Q5BKU9 147 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 PGBD2Q6P3X8 592 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 SLC37A3Q8NCC5 494 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 OR8D4Q8NGM9 314 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 ANGPTL6Q8NI99 470 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 RORBQ92753 470 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 REEP6Q96HR9 211 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 SSX3Q99909 188 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 PAPOLGQ9BWT3 736 aaKnown RBP12.51□□□□□ -0.41
CHMP3-202ENST00000393773 SNTG1Q9NSN8 517 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 CENPMQ9NSP4 180 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 AURKAIP1Q9NWT8 199 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-202ENST00000393773 SLC25A10Q9UBX3 287 aaPredicted RBP12.51□□□□□ -0.41
CHMP3-202ENST00000393773 CD300AQ9UGN4 299 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 N6AMT1Q9Y5N5 214 aa12.51□□□□□ -0.41
CHMP3-202ENST00000393773 DHRS12A0PJE2 317 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 NDUFAB1O14561 156 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 SIGLEC5O15389 551 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 CAV3P56539 151 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 SMIM11AP58511 58 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 GMFBP60983 142 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 GRB2P62993 217 aaKnown RBP12.5□□□□□ -0.41
CHMP3-202ENST00000393773 LRRC75BQ2VPJ9 315 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 GLYATQ6IB77 296 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 LYG1Q8N1E2 194 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 OR51G2Q8NGK0 314 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 OR10Z1Q8NGY1 313 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 OR2T6Q8NHC8 308 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 SGK3Q96BR1 496 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 NMNAT2Q9BZQ4 307 aa12.5□□□□□ -0.41
CHMP3-202ENST00000393773 FGF23Q9GZV9 251 aaPredicted RBP12.5□□□□□ -0.41
CHMP3-202ENST00000393773 VIPAS39Q9H9C1 493 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms