RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 AADACL3Q5VUY0 350 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 BTNL8Q6UX41 500 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 Q6ZSR3 168 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 SYT13Q7L8C5 426 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 ABHD12BQ7Z5M8 362 aaPredicted RBP8.83□□□□□ -1
COL17A1-203ENST00000393211 CBLN2Q8IUK8 224 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 WDFY1Q8IWB7 410 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 TMEM104Q8NE00 496 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 OR2I1PQ8NGU4 316 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 OR13G1Q8NGZ3 307 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 C10orf35Q96D05 121 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 TM2D1Q9BX74 207 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 SEC61A2Q9H9S3 476 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 TAF9BQ9HBM6 251 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 GPR84Q9NQS5 396 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 SLC22A11Q9NSA0 550 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 OR5AC2Q9NZP5 309 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 C14orf166Q9Y224 244 aaKnown RBP8.83□□□□□ -1
COL17A1-203ENST00000393211 POLR1DQ9Y2S0 133 aa8.83□□□□□ -1
COL17A1-203ENST00000393211 ADAMTS9Q9P2N4 1935 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 CHD7Q9P2D1 2997 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 PCNX3Q9H6A9 2034 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 IGLV3-12A0A075B6K2 115 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 IGHV1OR21-1A0A087WYE8 117 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 IGHV1OR15-9A0A0B4J2B8 117 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 MSGN1A6NI15 193 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 METTL12A8MUP2 240 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 DUX1O43812 170 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 ZNF354AO60765 605 aaPredicted RBP8.82□□□□□ -1
COL17A1-203ENST00000393211 ADAP1O75689 374 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 CRTAPO75718 401 aaPredicted RBP8.82□□□□□ -1
COL17A1-203ENST00000393211 RAD51DO75771 328 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 IFNA2P01563 188 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 IGLV3-1P01715 115 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 APOC1P02654 83 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 FCGR3AP08637 254 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 NAT2P11245 290 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 THBS4P35443 961 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 OR3A4PP47883 348 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 NPBWR1P48145 328 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 P2RY4P51582 365 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 DVL1P1P54792 670 aaPredicted RBP8.82□□□□□ -1
COL17A1-203ENST00000393211 SNU13P55769 128 aaKnown RBP8.82□□□□□ -1
COL17A1-203ENST00000393211 ZNF121P58317 390 aaPredicted RBP8.82□□□□□ -1
COL17A1-203ENST00000393211 LSM6P62312 80 aaKnown RBP8.82□□□□□ -1
COL17A1-203ENST00000393211 CSNK2A1P68400 391 aaPredicted RBP8.82□□□□□ -1
COL17A1-203ENST00000393211 SRSF3P84103 164 aaKnown RBP8.82□□□□□ -1
COL17A1-203ENST00000393211 FAM3AP98173 230 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 PDZK1IP1Q13113 114 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 RAB32Q13637 225 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 PEA15Q15121 130 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 RAB30Q15771 203 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 HIST3H3Q16695 136 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 TMEM268Q5VZI3 342 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 OPN5Q6U736 354 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 SLC16A14Q7RTX9 510 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 C15orf54Q8N8G6 183 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 NFAM1Q8NET5 270 aaPredicted RBP8.82□□□□□ -1
COL17A1-203ENST00000393211 CSNK2A3Q8NEV1 391 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 OR5L2Q8NGL0 311 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 OR14K1Q8NGZ2 314 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 LYPD6BQ8NI32 183 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 ARHGAP5-AS1Q96IT6 56 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 OR10C1Q96KK4 312 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 OXGR1Q96P68 337 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 GPER1Q99527 375 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 CNTNAP3Q9BZ76 1288 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 EGLN1Q9GZT9 426 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 PLEKHA2Q9HB19 425 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 SMCO4Q9NRQ5 59 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 DECR2Q9NUI1 292 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 TUBD1Q9UJT1 453 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 KPTNQ9Y664 436 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 SLCO1B1Q9Y6L6 691 aa8.82□□□□□ -1
COL17A1-203ENST00000393211 ALPK2Q86TB3 2170 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 A0A0U1RQV5 110 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 SHISA7A6NL88 538 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 TLX3O43711 291 aaPredicted RBP8.81□□□□□ -1
COL17A1-203ENST00000393211 TRAF3IP2O43734 574 aaPredicted RBP8.81□□□□□ -1
COL17A1-203ENST00000393211 CTSDP07339 412 aaPredicted RBP8.81□□□□□ -1
COL17A1-203ENST00000393211 HKR1P10072 659 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 MUC1P15941 1255 aaPredicted RBP8.81□□□□□ -1
COL17A1-203ENST00000393211 ZNF17P17021 662 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 RBMXP38159 391 aaKnown RBP8.81□□□□□ -1
COL17A1-203ENST00000393211 PTGFRP43088 359 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 FBXW4P57775 412 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 MYBPHQ13203 477 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 SMCO1Q147U7 214 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 SHHQ15465 462 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 PLPPR5Q32ZL2 321 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 CHRFAM7AQ494W8 412 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 RNF212Q495C1 297 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 FAM76BQ5HYJ3 339 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 TMPPEQ6ZT21 453 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 LANCL3Q6ZV70 420 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 RABEPKQ7Z6M1 372 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 TMEM200AQ86VY9 491 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 COMMD2Q86X83 199 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 APCDD1LQ8NCL9 501 aa8.81□□□□□ -1
COL17A1-203ENST00000393211 OR51T1Q8NGJ9 327 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms