RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 C17orf47Q8NEP4 570 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 CST7O76096 145 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 CSF2RBP32927 897 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 UBE2G2P60604 165 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 ANKRD16Q6P6B7 361 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 ZNF687Q8N1G0 1237 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 TMEM18Q96B42 140 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 SOX7Q9BT81 388 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 ADGRL4Q9HBW9 690 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 CYB5R1Q9UHQ9 305 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 SPTY2D1-AS1A0A0U1RR47 76 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 GLRA1P23415 457 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 LGALS4P56470 323 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 CLDN15P56746 228 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 RAC1P63000 192 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 INSM1Q01101 510 aaPredicted RBP11.8□□□□□ -0.52
LCA5-202ENST00000392959 CLEC12BQ2HXU8 276 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 TCTN1Q2MV58 587 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 COMMD1Q8N668 190 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 DUSP18Q8NEJ0 188 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 OR5B3Q8NH48 314 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 KCNE4Q8WWG9 221 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 ALG14Q96F25 216 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 EGLN1Q9GZT9 426 aa11.8□□□□□ -0.52
LCA5-202ENST00000392959 GAR1Q9NY12 217 aaKnown RBP11.8□□□□□ -0.52
LCA5-202ENST00000392959 ANKUB1A6NFN9 424 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 LILRA5A6NI73 299 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 G3V3Q6 166 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 CNIH1O95406 144 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 RD3LP0DJH9 198 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 CDAP32320 146 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 AKR1C3P42330 323 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 PMP22Q01453 160 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 OR2T2Q6IF00 324 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 THSD4Q6ZMP0 1018 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 OR2W3Q7Z3T1 314 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 LINC01555Q8NAE3 123 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 CST4P01036 141 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 FABP1P07148 127 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 RRASP10301 218 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 FPR2P25090 351 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 DMWDQ09019 674 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 HES1Q14469 280 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 SHHQ15465 462 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 FBXL14Q8N1E6 418 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 SPICQ8N5J4 248 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 NOXO1Q8NFA2 376 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 OR52N4Q8NGI2 321 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 ZNF586Q9NXT0 402 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 LAMP3Q9UQV4 416 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 KLF13Q9Y2Y9 288 aaPredicted RBP11.79□□□□□ -0.52
LCA5-202ENST00000392959 PCM1Q15154 2024 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 ITGB4P16144 1822 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 GP1BAP07359 652 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 FUT6P51993 359 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 SCAND1P57086 179 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 RPS23P62266 143 aaKnown RBP11.79□□□□□ -0.52
LCA5-202ENST00000392959 LHX8Q68G74 356 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 ZNF251Q9BRH9 671 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 CTDSP1Q9GZU7 261 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 RCL1Q9Y2P8 373 aaKnown RBP11.79□□□□□ -0.52
LCA5-202ENST00000392959 COL16A1Q07092 1604 aaPredicted RBP11.79□□□□□ -0.52
LCA5-202ENST00000392959 NRAPQ86VF7 1730 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 TRPM3Q9HCF6 1732 aaPredicted RBP11.79□□□□□ -0.52
LCA5-202ENST00000392959 SPTA1P02549 2419 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 CLEC18AA5D8T8 446 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 OR7C2O60412 319 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 TMEM11P17152 192 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 FUT3P21217 361 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 CD96P40200 585 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 FABP6P51161 128 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 FABP9Q0Z7S8 132 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 PJVKQ0ZLH3 352 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 FXNQ16595 210 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 GUK1Q16774 197 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 CLEC18CQ8NCF0 446 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 OR1N1Q8NGS0 311 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 AKR7LQ8NHP1 331 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 IFI44Q8TCB0 444 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 SPSB1Q96BD6 273 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 SPACA9Q96E40 222 aaPredicted RBP11.79□□□□□ -0.52
LCA5-202ENST00000392959 ST6GAL2Q96JF0 529 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 S1PR3Q99500 378 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 CHST6Q9GZX3 395 aa11.79□□□□□ -0.52
LCA5-202ENST00000392959 SMCHD1A6NHR9 2005 aa11.78□□□□□ -0.52
LCA5-202ENST00000392959 LMO7DNF2Z398 122 aa11.78□□□□□ -0.52
LCA5-202ENST00000392959 DVL1O14640 695 aa11.78□□□□□ -0.52
LCA5-202ENST00000392959 SPRY1O43609 319 aaPredicted RBP11.78□□□□□ -0.52
LCA5-202ENST00000392959 CTSVO60911 334 aa11.78□□□□□ -0.52
LCA5-202ENST00000392959 CBR3O75828 277 aa11.78□□□□□ -0.52
LCA5-202ENST00000392959 DVL1P1P54792 670 aaPredicted RBP11.78□□□□□ -0.52
LCA5-202ENST00000392959 CEACAM16Q2WEN9 425 aa11.78□□□□□ -0.52
LCA5-202ENST00000392959 SP6Q3SY56 376 aa11.78□□□□□ -0.52
LCA5-202ENST00000392959 DEGS2Q6QHC5 323 aa11.78□□□□□ -0.52
LCA5-202ENST00000392959 ZNF574Q6ZN55 896 aaPredicted RBP11.78□□□□□ -0.52
LCA5-202ENST00000392959 DEFB108BQ8NET1 73 aa11.78□□□□□ -0.52
LCA5-202ENST00000392959 ALKBH3Q96Q83 286 aaPredicted RBP11.78□□□□□ -0.52
LCA5-202ENST00000392959 DEFB127Q9H1M4 99 aa11.78□□□□□ -0.52
LCA5-202ENST00000392959 DNAJB12Q9NXW2 375 aaKnown RBP11.78□□□□□ -0.52
LCA5-202ENST00000392959 BTAF1O14981 1849 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms