RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 LY6G6EA0A0G2JKS1 128 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 A0A1W2PPE3 182 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 ETV2O00321 342 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 SNRPCP09234 159 aaKnown RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 H2AFB1P0C5Y9 115 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 MPLP40238 635 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 SLC35A1P78382 337 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 GK2Q14410 553 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 MEF2DQ14814 521 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 SCGB2B2Q4G0G5 96 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 PRAMEF20Q5VT98 475 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 ASPHD2Q6ICH7 369 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 SLC36A1Q7Z2H8 476 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 BPIFB2Q8N4F0 458 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 WFDC12Q8WWY7 111 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 TMEM41AQ96HV5 264 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 JSRP1Q96MG2 331 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 ZMAT3Q9HA38 289 aaKnown RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 U3KQA8 63 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 LAMA1P25391 3075 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 FXYD6-FXYD2A0A087WZ82 144 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 M0QYG6 137 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 EFNA2O43921 213 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 OR2A4O95047 310 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 TTRP02766 147 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 NPSP0C0P6 89 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 USF2Q15853 346 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 RNASE10Q5GAN6 216 aaKnown RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF385CQ66K41 422 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF101Q8IZC7 436 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 OR13C9Q8NGT0 318 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 COQ8AQ8NI60 647 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 ELP5Q8TE02 316 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 RNF138Q8WVD3 245 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 OR2A7Q96R45 310 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 FXYD6Q9H0Q3 95 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 SLC26A1Q9H2B4 701 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 FAM206AQ9NX38 181 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 PIPOXQ9P0Z9 390 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF107Q9UII5 783 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 TMEM235A6NFC5 223 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 LMX1BO60663 402 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 PMS2P2O95744 297 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 ONECUT2O95948 504 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 CSN2P05814 226 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 JMJD7P0C870 316 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF35P13682 527 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 PVALBP20472 110 aaPredicted RBP8.54□□□□□ -1.04
COL6A3-204ENST00000392003 CDNFQ49AH0 187 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 C3P1Q6ZMU1 363 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF283Q8N7M2 679 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 OR4D6Q8NGJ1 314 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 OR6X1Q8NH79 312 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 MRPL13Q9BYD1 178 aaKnown RBP8.54□□□□□ -1.04
COL6A3-204ENST00000392003 STRADBQ9C0K7 418 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 PRO1933Q9H354 126 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 NCOR1P1Q9H4R4 102 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 B3GAT1Q9P2W7 334 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 TECTAO75443 2155 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 GPR31O00270 319 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 S100A8P05109 93 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 ADH6P28332 368 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 PTGDSP41222 190 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 OC90Q02509 493 aaPredicted RBP8.54□□□□□ -1.04
COL6A3-204ENST00000392003 IKZF1Q13422 519 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 INPP5JQ15735 1006 aaPredicted RBP8.54□□□□□ -1.04
COL6A3-204ENST00000392003 NCMAPQ5T1S8 102 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 AWAT2Q6E213 333 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 NHLRC1Q6VVB1 395 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 MEX3BQ6ZN04 569 aaKnown RBP8.54□□□□□ -1.04
COL6A3-204ENST00000392003 S100A7AQ86SG5 101 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 BIVMQ86UB2 503 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 MUC20Q8N307 709 aaPredicted RBP8.54□□□□□ -1.04
COL6A3-204ENST00000392003 TMEM105Q8N8V8 129 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 RNASE11Q8TAA1 199 aaKnown RBP8.54□□□□□ -1.04
COL6A3-204ENST00000392003 OR51E1Q8TCB6 317 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 ZBTB8AQ96BR9 441 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 MRPS24Q96EL2 167 aaKnown RBP8.54□□□□□ -1.04
COL6A3-204ENST00000392003 PDCD10Q9BUL8 212 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 TMPRSS13Q9BYE2 586 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 POFUT1Q9H488 388 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 CNTD2Q9H8S5 307 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 WDR54Q9H977 334 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 ASCL3Q9NQ33 180 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 KLHL13Q9P2N7 655 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 SLC5A6Q9Y289 635 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 CPAMD8Q8IZJ3 1885 aa8.54□□□□□ -1.04
COL6A3-204ENST00000392003 A0A087WZY1 265 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 OR2M5A3KFT3 312 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 IFNA6P05013 189 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 QDPRP09417 244 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 OTX2P32243 289 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 FOLR3P41439 243 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 SEC61A1P61619 476 aaKnown RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 EXT1Q16394 746 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 LCN10Q6JVE6 187 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 RGS7BPQ6MZT1 257 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 SLC25A24Q6NUK1 477 aa8.53□□□□□ -1.04
COL6A3-204ENST00000392003 ABHD12BQ7Z5M8 362 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-204ENST00000392003 BVESQ8NE79 360 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms