RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 MRM1Q6IN84 353 aaKnown RBP0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 KRTAP5-11Q6L8G4 156 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 C8orf82Q6P1X6 216 aaPredicted RBP0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 NIPAL3Q6P499 406 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 OLFML1Q6UWY5 402 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 ZNF813Q6ZN06 617 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 Q6ZR03 302 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 Q6ZS49 121 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 C3orf62Q6ZUJ4 267 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 TAS2R42Q7RTR8 314 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 C17orf64Q86WR6 236 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 FAM90A1Q86YD7 464 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 SLC22A15Q8IZD6 547 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 FAM216BQ8N7L0 139 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 ZNF614Q8N883 585 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 OR8D4Q8NGM9 314 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 ANGPTL6Q8NI99 470 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 Q8TCH9 128 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 RASSF5Q8WWW0 418 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 NT5C3BQ969T7 300 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 APOBEC3DQ96AK3 386 aaPredicted RBP0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 TMEM45BQ96B21 275 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 CMBLQ96DG6 245 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 RITA1Q96K30 269 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 ZNF75AQ96N20 296 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 FANCD2OSQ96PS1 177 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 ALKBH3Q96Q83 286 aaPredicted RBP0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 CPXM1Q96SM3 734 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 CRACR2AQ9BSW2 395 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 ABHD14AQ9BUJ0 271 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 LINC00470Q9BZP3 86 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 PCBD2Q9H0N5 130 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 TMEM60Q9H2L4 133 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 RPF2Q9H7B2 306 aaKnown RBP0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 GPR35Q9HC97 309 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 PRM3Q9NNZ6 103 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 NRN1Q9NPD7 142 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 LZTFL1Q9NQ48 299 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 POLE4Q9NR33 117 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 FARSBQ9NSD9 589 aaKnown RBP0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 TMEM100Q9NV29 134 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 EXOC1Q9NV70 894 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 BFARQ9NZS9 450 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 RHCGQ9UBD6 479 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 NDUFA12Q9UI09 145 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 MRTO4Q9UKD2 239 aaKnown RBP0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 RNF150Q9ULK6 438 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 AURKCQ9UQB9 309 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 FOXA2Q9Y261 457 aaPredicted RBP0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 SLC22A14Q9Y267 594 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 COX11Q9Y6N1 276 aa0.44□□□□□ -2.34
RNU6-42P-201ENST00000384165 TRBV20-1A0A075B6N2 111 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 IGHV3OR16-12A0A075B7B8 117 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 IGLV3-32A0A0A0MS00 114 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 A0A1W2PQL4 384 aaPredicted RBP0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 hCG_1807616A0A1W2PRN6 198 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 FAM168BA1KXE4 195 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 ARRDC5A6NEK1 342 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 ZNF99A8MXY4 864 aaPredicted RBP0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 IBA57-AS1B1ANH7 110 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 AKR1B15C9JRZ8 316 aaPredicted RBP0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 RPL36A-HNRNPH2H7BZ11 118 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 J3KTA2 159 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 TOR1AO14656 332 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 FGF17O60258 216 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 S1PR2O95136 353 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 KRT6AP02538 564 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 MT-ND6P03923 174 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 CLPSP04118 112 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 SERPINA6P08185 405 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 FAM58BPP0C7Q3 252 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 PATE4P0C8F1 98 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 APELAP0DMC3 54 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 T-ENOLP0DO92 83 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 HPGDP15428 266 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 PECAM1P16284 738 aaPredicted RBP0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 TUBG1P23258 451 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 ATP5A1P25705 553 aaKnown RBP0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 IVDP26440 423 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 MAPK1P28482 360 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 FCGR2CP31995 323 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 GLP1RP43220 463 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 BDKRB1P46663 353 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 PRIM2P49643 509 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 PLA2G16P53816 162 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 CAV3P56539 151 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 KRTAP10-12P60413 245 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 NUTF2P61970 127 aaKnown RBP0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 ACTA2P62736 377 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 RPL31P62899 125 aaKnown RBP0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 ACTG2P63267 376 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 ACTC1P68032 377 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 ACTA1P68133 377 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 SLC35A1P78382 337 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 IGLV3-21P80748 117 aaPredicted RBP0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 FOXF1Q12946 379 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 NAB1Q13506 487 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 MEF2DQ14814 521 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 KIAA0040Q15053 153 aa0.43□□□□□ -2.34
RNU6-42P-201ENST00000384165 TMED2Q15363 201 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms