RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 EPHA1P21709 976 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 EIF1P41567 113 aaKnown RBP16.86■□□□□ 0.29
CSPG5-202ENST00000383738 PPP1R1AQ13522 171 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 SLC16A9Q7RTY1 509 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 PIGTQ969N2 578 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 GUCD1Q96NT3 240 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 JAM3Q9BX67 310 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 MEGF11A6BM72 1044 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 BCL2L11O43521 198 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 ADAP1O75689 374 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 IGKV1D-16P01601 117 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 SFTA3P0C7M3 94 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 EFNB2P52799 333 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 PPIAP62937 165 aaKnown RBP16.86■□□□□ 0.29
CSPG5-202ENST00000383738 MYBPHQ13203 477 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 RGS7BPQ6MZT1 257 aaPredicted RBP16.86■□□□□ 0.29
CSPG5-202ENST00000383738 OR2G2Q8NGZ5 317 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 BORCS8Q96FH0 119 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 ACACBO00763 2458 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 PATE4P0C8F1 98 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 C3AR1Q16581 482 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 ANGPTL5Q86XS5 388 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 SGPP2Q8IWX5 399 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 ARHGDIGQ99819 225 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 MRPS18BQ9Y676 258 aaKnown RBP16.86■□□□□ 0.29
CSPG5-202ENST00000383738 HTTP42858 3142 aa16.86■□□□□ 0.29
CSPG5-202ENST00000383738 MPDZO75970 2070 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 A0A087WZY1 265 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 XRCC2O43543 280 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 IGHEP01854 428 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 ERGP11308 486 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 APOBEC1P41238 236 aaKnown RBP16.85■□□□□ 0.29
CSPG5-202ENST00000383738 MRPL49Q13405 166 aaKnown RBP16.85■□□□□ 0.29
CSPG5-202ENST00000383738 RNF165Q6ZSG1 346 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 RASL10BQ96S79 203 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 CHST11Q9NPF2 352 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 SLCO1C1Q9NYB5 712 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 PILRBQ9UKJ0 227 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 TRAV1-2A0A0B4J238 106 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 A0A1W2PR80 420 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 MFSD2BA6NFX1 497 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 ZNHIT1O43257 154 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 MPZL1O95297 269 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 DIRAS3O95661 229 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 EFNA3P52797 238 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.85■□□□□ 0.29
CSPG5-202ENST00000383738 SAP25Q8TEE9 199 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 HGDQ93099 445 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 UMAD1C9J7I0 102 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 PHOX2AO14813 284 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 TBX19O60806 448 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 GLSO94925 669 aaPredicted RBP16.85■□□□□ 0.29
CSPG5-202ENST00000383738 HAGHQ16775 308 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 SULF2Q8IWU5 870 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 CT55Q8WUE5 264 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 ZNF705FA8MVS1 300 aaPredicted RBP16.85■□□□□ 0.29
CSPG5-202ENST00000383738 ZNF705DP0CH99 300 aaPredicted RBP16.85■□□□□ 0.29
CSPG5-202ENST00000383738 ZNF705BP0CI00 300 aaPredicted RBP16.85■□□□□ 0.29
CSPG5-202ENST00000383738 G0S2P27469 103 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 PTGFRP43088 359 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 GALNT16Q8N428 558 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 SECTM1Q8WVN6 248 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 FRZBQ92765 325 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 AICDAQ9GZX7 198 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 PLEKHJ1Q9NW61 149 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 EXOGQ9Y2C4 368 aaKnown RBP16.85■□□□□ 0.29
CSPG5-202ENST00000383738 UBE2J1Q9Y385 318 aaPredicted RBP16.85■□□□□ 0.29
CSPG5-202ENST00000383738 ETV7Q9Y603 341 aa16.85■□□□□ 0.29
CSPG5-202ENST00000383738 PHYHO14832 338 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 XRCC3O43542 346 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 ABHD16AO95870 558 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 TAGLN2P37802 199 aaKnown RBP16.84■□□□□ 0.29
CSPG5-202ENST00000383738 GLP1RP43220 463 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 LIMS1P48059 325 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 SELENOVP59797 346 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 FOXK1P85037 733 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 WDR74Q6RFH5 385 aaPredicted RBP16.84■□□□□ 0.29
CSPG5-202ENST00000383738 C9orf40Q8IXQ3 194 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 PAPOLGQ9BWT3 736 aaKnown RBP16.84■□□□□ 0.29
CSPG5-202ENST00000383738 MMP25Q9NPA2 562 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 C5orf42Q9H799 3197 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 TRAV8-7A0A075B6U6 113 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 LNP1A1A4G5 178 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 RECKO95980 971 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 B4GALT1P15291 398 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 MFAP5Q13361 173 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 PPA1Q15181 289 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 DMKNQ6E0U4 476 aaPredicted RBP16.84■□□□□ 0.29
CSPG5-202ENST00000383738 RXFP4Q8TDU9 374 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 DNASE2BQ8WZ79 361 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 RAB3CQ96E17 227 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 GIMAP5Q96F15 307 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 UNKLQ9H9P5 680 aaKnown RBP16.84■□□□□ 0.29
CSPG5-202ENST00000383738 TUBG2Q9NRH3 451 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 MTFP1Q9UDX5 166 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 TCFL5Q9UL49 500 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 PCDHGA1Q9Y5H4 931 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 KCNMB2Q9Y691 235 aa16.84■□□□□ 0.29
CSPG5-202ENST00000383738 ANKRD20A5PA0PJZ0 165 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms