RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 OR1J1Q8NGS3 322 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 PIGCQ92535 297 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 SORCS2Q96PQ0 1159 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 OPA3Q9H6K4 179 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 CNTD2Q9H8S5 307 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 ZNF816-ZNF321PA0A0X1KG74 233 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 J3QW42 95 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 ICMTO60725 284 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 TMEM127O75204 238 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 CALCBP10092 127 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 CALCRP30988 508 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 ETV6P41212 452 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 ZNF45Q02386 682 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 FAM166AQ6J272 317 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 LYPD6Q86Y78 171 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 DTX3Q8N9I9 347 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 OR4D6Q8NGJ1 314 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 OR6M1Q8NGM8 313 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 PIGTQ969N2 578 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 ZC3HAV1LQ96H79 300 aaKnown RBP23.1■■□□□ 1.29
MSX1-201ENST00000382723 OR2J1Q9GZK6 312 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 KCNK15Q9H427 330 aa23.1■■□□□ 1.29
MSX1-201ENST00000382723 METTL17Q9H7H0 456 aaPredicted RBP23.1■■□□□ 1.29
MSX1-201ENST00000382723 NRASP01111 189 aa23.09■■□□□ 1.29
MSX1-201ENST00000382723 CD37P11049 281 aa23.09■■□□□ 1.29
MSX1-201ENST00000382723 AZGP1P25311 298 aaKnown RBP23.09■■□□□ 1.29
MSX1-201ENST00000382723 CFPP27918 469 aa23.09■■□□□ 1.29
MSX1-201ENST00000382723 ASCL1P50553 236 aa23.09■■□□□ 1.29
MSX1-201ENST00000382723 FAM131AQ6UXB0 335 aa23.09■■□□□ 1.29
MSX1-201ENST00000382723 LRRC28Q86X40 367 aaPredicted RBP23.09■■□□□ 1.29
MSX1-201ENST00000382723 BHLHE23Q8NDY6 225 aa23.09■■□□□ 1.29
MSX1-201ENST00000382723 SLC25A28Q96A46 364 aa23.09■■□□□ 1.29
MSX1-201ENST00000382723 V9GYH0 126 aa23.09■■□□□ 1.29
MSX1-201ENST00000382723 FABP12A6NFH5 140 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 UQCRFS1P47985 274 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 EVX1P49640 407 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 NAAAQ02083 359 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 C1orf100Q5SVJ3 147 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 SLC25A40Q8TBP6 338 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 FAM3DQ96BQ1 224 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 GPER1Q99527 375 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 MRI1Q9BV20 369 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 CRIM1Q9NZV1 1036 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 KCNN3Q9UGI6 736 aa23.08■■□□□ 1.29
MSX1-201ENST00000382723 GNLYP22749 145 aa23.08■■□□□ 1.28
MSX1-201ENST00000382723 TLE1Q04724 770 aa23.08■■□□□ 1.28
MSX1-201ENST00000382723 DCTN2Q13561 401 aaKnown RBP23.08■■□□□ 1.28
MSX1-201ENST00000382723 BORCS5Q969J3 196 aa23.08■■□□□ 1.28
MSX1-201ENST00000382723 RFT1Q96AA3 541 aa23.08■■□□□ 1.28
MSX1-201ENST00000382723 CMBLQ96DG6 245 aa23.08■■□□□ 1.28
MSX1-201ENST00000382723 USB1Q9BQ65 265 aaKnown RBP23.08■■□□□ 1.28
MSX1-201ENST00000382723 PAPOLGQ9BWT3 736 aaKnown RBP23.08■■□□□ 1.28
MSX1-201ENST00000382723 EXTL2Q9UBQ6 330 aa23.08■■□□□ 1.28
MSX1-201ENST00000382723 CD300LBA8K4G0 201 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 ZNF850A8MQ14 1090 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 RAD52P43351 418 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 POU3F4P49335 361 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 C2orf76Q3KRA6 126 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 UBE2NLQ5JXB2 153 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 TMEM42Q69YG0 159 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 OR2T2Q6IF00 324 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 MOB3CQ70IA8 216 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 WFDC8Q8IUA0 241 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 UQCC2Q9BRT2 126 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 GPR160Q9UJ42 338 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 SMG1Q96Q15 3661 aaKnown RBP23.07■■□□□ 1.28
MSX1-201ENST00000382723 CACNA1BQ00975 2339 aa23.07■■□□□ 1.28
MSX1-201ENST00000382723 IGSF10Q6WRI0 2623 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 NKX2-6A6NCS4 301 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 ALX3O95076 343 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 ALDOBP05062 364 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 PRF1P14222 555 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 ARSBP15848 533 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 PLA2G7Q13093 441 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 CNN3Q15417 329 aaKnown RBP23.06■■□□□ 1.28
MSX1-201ENST00000382723 ZBTB37Q5TC79 503 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 PLCXD3Q63HM9 321 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 UBASH3BQ8TF42 649 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 CYSLTR2Q9NS75 346 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 MYEF2Q9P2K5 600 aaKnown RBP23.06■■□□□ 1.28
MSX1-201ENST00000382723 ERRFI1Q9UJM3 462 aaPredicted RBP23.06■■□□□ 1.28
MSX1-201ENST00000382723 MYO7BQ6PIF6 2116 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 FAM230AA0A1W2PPH8 454 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 PPP5CP53041 499 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 KISS1Q15726 138 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 C16orf87Q6PH81 154 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 SEZ6L2Q6UXD5 910 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 FBXW12Q6X9E4 464 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 SNX29P2Q8IUI4 249 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 OR4M1Q8NGD0 313 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 ETV7Q9Y603 341 aa23.06■■□□□ 1.28
MSX1-201ENST00000382723 A0A1B0GUH1 482 aa23.05■■□□□ 1.28
MSX1-201ENST00000382723 APOA1P02647 267 aa23.05■■□□□ 1.28
MSX1-201ENST00000382723 OR3A4PP47883 348 aa23.05■■□□□ 1.28
MSX1-201ENST00000382723 C3orf36Q3SXR2 165 aa23.05■■□□□ 1.28
MSX1-201ENST00000382723 UNQ6126/PRO20091Q6UXV3 157 aa23.05■■□□□ 1.28
MSX1-201ENST00000382723 CMTM4Q8IZR5 234 aa23.05■■□□□ 1.28
MSX1-201ENST00000382723 GALNT11Q8NCW6 608 aa23.05■■□□□ 1.28
MSX1-201ENST00000382723 CSNK2A3Q8NEV1 391 aa23.05■■□□□ 1.28
MSX1-201ENST00000382723 OR5D18Q8NGL1 313 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms