RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 PTRH2Q9Y3E5 179 aaKnown RBP14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 TEX13DA0A0J9YY54 714 aaPredicted RBP14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 ZFAND5O76080 213 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 MPZP25189 248 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 DAP3P51398 398 aaKnown RBP14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 TMEM50BP56557 158 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 ANKRD55Q3KP44 614 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 TMEM176BQ3YBM2 270 aaPredicted RBP14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 H3F3CQ6NXT2 135 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 DNM1P34Q6PK57 102 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 CLEC18BQ6UXF7 455 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 CCDC36Q8IYA8 594 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 SVBPQ8N300 66 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 OR5D14Q8NGL3 314 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 MYOTQ9UBF9 498 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 LHFPL6Q9Y693 200 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 LY6G6EA0A0G2JKS1 128 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 A6NIZ1 184 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 F8VVB4 439 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 F8VWA3 439 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 F10P00742 488 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 TPT1P13693 172 aaKnown RBP14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 RAP1BP61224 184 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 RAP1AP62834 184 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 FLI1Q01543 452 aaPredicted RBP14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 MYBPHQ13203 477 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 RSPO4Q2I0M5 234 aaPredicted RBP14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 ARHGAP5-AS1Q96IT6 56 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 OR10C1Q96KK4 312 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 C1orf147Q96MC9 270 aaPredicted RBP14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 SPSB2Q99619 263 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 DUSP23Q9BVJ7 150 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 TREM1Q9NP99 234 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 MRPS28Q9Y2Q9 187 aaKnown RBP14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 U3KQA8 63 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 MYO7BQ6PIF6 2116 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 RAMP1O60894 148 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 NFYBP25208 207 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 SUPT4H1P63272 117 aaKnown RBP14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 OR5AS1Q8N127 324 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 TERB2Q8NHR7 220 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 SLC39A7Q92504 469 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 RAB3CQ96E17 227 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 HRH4Q9H3N8 390 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 CHST11Q9NPF2 352 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 B3GAT1Q9P2W7 334 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF629Q9UEG4 869 aaPredicted RBP14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 MLXQ9UH92 298 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF175Q9Y473 711 aa14.35□□□□□ -0.11
NKX3-1-201ENST00000380871 RAB19A4D1S5 217 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 ANKUB1A6NFN9 424 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 H7C2Y5 167 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 RER1O15258 196 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF20P17024 532 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF585AQ6P3V2 769 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 DRAM2Q6UX65 266 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 SERINC1Q9NRX5 453 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 KLHL13Q9P2N7 655 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF705EA8MWA4 302 aaPredicted RBP14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 E9PLN8 166 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF17P17021 662 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 MST1LQ2TV78 715 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 UQCC3Q6UW78 93 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 STOML3Q8TAV4 291 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 ST6GALNAC5Q9BVH7 336 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 SDHAF3Q9NRP4 125 aa14.34□□□□□ -0.11
NKX3-1-201ENST00000380871 IGHV3-15A0A0B4J1V0 119 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 FARS2O95363 451 aaKnown RBP14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 FAM157CP0CG43 387 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 RCC1P18754 421 aaPredicted RBP14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 TMEM128Q5BJH2 165 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 SHEQ5VZ18 495 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 FAHD2BQ6P2I3 314 aaPredicted RBP14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 DEGS2Q6QHC5 323 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 PGAP1Q75T13 922 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 SLC30A7Q8NEW0 376 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 OR8B12Q8NGG6 310 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 OR5L2Q8NGL0 311 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 C2CD4CQ8TF44 421 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 DDIT4LQ96D03 193 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 FAHD2AQ96GK7 314 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 UQCC2Q9BRT2 126 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 GPR84Q9NQS5 396 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 GSKIPQ9P0R6 139 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 ASH2LQ9UBL3 628 aa14.33□□□□□ -0.11
NKX3-1-201ENST00000380871 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF814B7Z6K7 855 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 AGPAT2O15120 278 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 CDC14BO60729 498 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 CRTAPO75718 401 aaPredicted RBP14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 CD79AP11912 226 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 PVALBP20472 110 aaPredicted RBP14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 GLRA1P23415 457 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 ZFP82Q8N141 532 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 DTWD2Q8NBA8 298 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 HCKP08631 526 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 HIST1H1DP16402 221 aaKnown RBP14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 ID4P47928 161 aa14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 ZNF121P58317 390 aaPredicted RBP14.33□□□□□ -0.12
NKX3-1-201ENST00000380871 RAB32Q13637 225 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms