RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 DCBLD2Q96PD2 775 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 MICU1Q9BPX6 476 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 JAM3Q9BX67 310 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 HIPK2Q9H2X6 1198 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 NXT1Q9UKK6 140 aaKnown RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 SPTBN4Q9H254 2564 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 CIB4A0PJX0 185 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 CDX4O14627 284 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 SC5DO75845 299 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 ABHD16AO95870 558 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 CDK2P24941 298 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 AGFG1P52594 562 aaKnown RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 GUCA2AQ02747 115 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 C3AR1Q16581 482 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 RNF151Q2KHN1 245 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 GLYATL3Q5SZD4 288 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 TMEM17Q86X19 198 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 OR2AJ1Q8NGZ0 328 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 OR52I2Q8NH67 350 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 DVL3Q92997 716 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 RNF166Q96A37 237 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 ALKBH3Q96Q83 286 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 B3GAT1Q9P2W7 334 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 OR5V1Q9UGF6 321 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 ELF5Q9UKW6 265 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 ATP23Q9Y6H3 246 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 LOC107986453A0A1B0GWG9 222 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 INMT-MINDY4F8WBC2 141 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 NPR2P20594 1047 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 DTYMKP23919 212 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 CEBPDP49716 269 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 SELENOPP49908 381 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 SNRPD2P62316 118 aaKnown RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 BAMBIQ13145 260 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 CHMP1BQ7LBR1 199 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 ABHD12BQ7Z5M8 362 aaPredicted RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 PPP1R32Q7Z5V6 425 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 BATF2Q8N1L9 274 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 OR13C9Q8NGT0 318 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 OR52N5Q8NH56 324 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 OR51E1Q8TCB6 317 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 KCNE4Q8WWG9 221 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 C14orf144Q96I85 54 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 C7orf50Q9BRJ6 194 aaKnown RBP9.57□□□□□ -0.88
NEDD9-201ENST00000379433 ATG5Q9H1Y0 275 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 TRAPPC4Q9Y296 219 aa9.57□□□□□ -0.88
NEDD9-201ENST00000379433 TRAV18A0A075B6X5 111 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 CXCL13O43927 109 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 TXNDC12O95881 172 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 IGHG1P01857 330 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 IFNA4P05014 189 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ITGA5P08648 1049 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 SRSF6Q13247 344 aaKnown RBP9.56□□□□□ -0.88
NEDD9-201ENST00000379433 SCGB2A2Q13296 93 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 EXT1Q16394 746 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ATAD3CQ5T2N8 411 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 LHFPL4Q7Z7J7 247 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 VASH2Q86V25 355 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ACOT12Q8WYK0 555 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 SLAMF6Q96DU3 332 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ZNF222Q9UK12 451 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 TOXO94900 526 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 CELA3AP09093 270 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 CCNOP22674 350 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 SNTB2Q13425 540 aaKnown RBP9.56□□□□□ -0.88
NEDD9-201ENST00000379433 MOGAT2Q3SYC2 334 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ATPAF1Q5TC12 328 aaPredicted RBP9.56□□□□□ -0.88
NEDD9-201ENST00000379433 TMPRSS7Q7RTY8 843 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ZNF283Q8N7M2 679 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 DEFB124Q8NES8 71 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 MCHR2Q969V1 340 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 S100A16Q96FQ6 103 aaKnown RBP9.56□□□□□ -0.88
NEDD9-201ENST00000379433 TAAR9Q96RI9 348 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 DNTTIP1Q9H147 329 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ELL3Q9HB65 397 aaPredicted RBP9.56□□□□□ -0.88
NEDD9-201ENST00000379433 RBFOX1Q9NWB1 397 aaKnown RBP9.56□□□□□ -0.88
NEDD9-201ENST00000379433 OR52A1Q9UKL2 312 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 B3GALT5Q9Y2C3 310 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 A0A0J9YW62 118 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 TMEM212A6NML5 194 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 S100A8P05109 93 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 CD2P06729 351 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 CD59P13987 128 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ABOP16442 354 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 POU3F2P20265 443 aaPredicted RBP9.56□□□□□ -0.88
NEDD9-201ENST00000379433 CTSSP25774 331 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 DDOSTP39656 456 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 GDNFP39905 211 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ASAH1Q13510 395 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ZNF684Q5T5D7 378 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 CDCP2Q5VXM1 449 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 SLC25A25Q6KCM7 469 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 DNM1P34Q6PK57 102 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 FAM57BQ71RH2 274 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 RNF144BQ7Z419 303 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 CHST4Q8NCG5 386 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 NEK7Q8TDX7 302 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 CYYR1Q96J86 154 aa9.56□□□□□ -0.88
NEDD9-201ENST00000379433 ZNF48Q96MX3 618 aaPredicted RBP9.56□□□□□ -0.88
NEDD9-201ENST00000379433 CACNG6Q9BXT2 260 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms