RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 RAB38P57729 211 aa12.15□□□□□ -0.46
KIF3A-201ENST00000378735 DEGS2Q6QHC5 323 aa12.15□□□□□ -0.46
KIF3A-201ENST00000378735 OR10AD1Q8NGE0 317 aa12.15□□□□□ -0.46
KIF3A-201ENST00000378735 OR13C9Q8NGT0 318 aa12.15□□□□□ -0.46
KIF3A-201ENST00000378735 SLC25A43Q8WUT9 341 aaPredicted RBP12.15□□□□□ -0.46
KIF3A-201ENST00000378735 NELFAQ9H3P2 528 aa12.15□□□□□ -0.46
KIF3A-201ENST00000378735 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
KIF3A-201ENST00000378735 PISDQ9UG56 409 aa12.15□□□□□ -0.46
KIF3A-201ENST00000378735 CACNA1CQ13936 2221 aa12.15□□□□□ -0.47
KIF3A-201ENST00000378735 HNRNPA1P09651 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
KIF3A-201ENST00000378735 HIST1H1DP16402 221 aaKnown RBP12.14□□□□□ -0.47
KIF3A-201ENST00000378735 RBMXP38159 391 aaKnown RBP12.14□□□□□ -0.47
KIF3A-201ENST00000378735 AFF3P51826 1226 aaKnown RBP12.14□□□□□ -0.47
KIF3A-201ENST00000378735 TAS2R46P59540 309 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
KIF3A-201ENST00000378735 RNF4P78317 190 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 FNDC7Q5VTL7 733 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 TTLL10Q6ZVT0 673 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 BCORP1Q8N888 145 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 OR13G1Q8NGZ3 307 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 ZNF519Q8TB69 540 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 HPSE2Q8WWQ2 592 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 KTI12Q96EK9 354 aaPredicted RBP12.14□□□□□ -0.47
KIF3A-201ENST00000378735 TGM7Q96PF1 710 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 MRPL37Q9BZE1 423 aaKnown RBP12.14□□□□□ -0.47
KIF3A-201ENST00000378735 TGIF2Q9GZN2 237 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 PTGES2Q9H7Z7 377 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 SRPK3Q9UPE1 567 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 IFNA21P01568 189 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 RNH1P13489 461 aaKnown RBP12.14□□□□□ -0.47
KIF3A-201ENST00000378735 CTNNB1P35222 781 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 NHLH2Q02577 135 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 UNQ6494/PRO21346Q6UXR6 183 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 NDUFAF3Q9BU61 184 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 PARP12Q9H0J9 701 aaKnown RBP12.14□□□□□ -0.47
KIF3A-201ENST00000378735 LPAR5Q9H1C0 372 aa12.14□□□□□ -0.47
KIF3A-201ENST00000378735 MRPS2Q9Y399 296 aaKnown RBP12.14□□□□□ -0.47
KIF3A-201ENST00000378735 A8MWP6 167 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 H3BQ15 152 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 ADH1CP00326 375 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 HEXBP07686 556 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 RAB4AP20338 218 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 TAGLN2P37802 199 aaKnown RBP12.13□□□□□ -0.47
KIF3A-201ENST00000378735 RPL27P61353 136 aaKnown RBP12.13□□□□□ -0.47
KIF3A-201ENST00000378735 FIGLAQ6QHK4 219 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 TMEFF1Q8IYR6 380 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 OR52N4Q8NGI2 321 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 MFSD8Q8NHS3 518 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 TAAR8Q969N4 342 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 RERGQ96A58 199 aaPredicted RBP12.13□□□□□ -0.47
KIF3A-201ENST00000378735 PRODH2Q9UF12 536 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 DVL1O14640 695 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 GPR137BO60478 399 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 SLC16A7O60669 478 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 PRH1P02810 166 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 CXCL1P09341 107 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 FGF7P21781 194 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 PTCRAQ6ISU1 281 aaPredicted RBP12.13□□□□□ -0.47
KIF3A-201ENST00000378735 PRSS41Q7RTY9 318 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 TGIF2LXQ8IUE1 241 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 FOXRED2Q8IWF2 684 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 OR2I1PQ8NGU4 316 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 SPPL3Q8TCT6 385 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 RNASEH2CQ8TDP1 164 aaKnown RBP12.13□□□□□ -0.47
KIF3A-201ENST00000378735 ERGIC1Q969X5 290 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 RAB39BQ96DA2 213 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 ZFYVE21Q9BQ24 234 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 SMIM3Q9BZL3 60 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 C14orf166Q9Y224 244 aaKnown RBP12.13□□□□□ -0.47
KIF3A-201ENST00000378735 A8MVM7 634 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 BGLAPP02818 100 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 CT45A8P0DMV1 189 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 CT45A9P0DMV2 189 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 PI3P19957 117 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 HNF4GQ14541 408 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 CT45A2Q5DJT8 189 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 GRASPQ7Z6J2 395 aaPredicted RBP12.13□□□□□ -0.47
KIF3A-201ENST00000378735 RCC1LQ96I51 464 aaKnown RBP12.13□□□□□ -0.47
KIF3A-201ENST00000378735 SPACA7Q96KW9 195 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 SOX7Q9BT81 388 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 PRO1933Q9H354 126 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 MTCH2Q9Y6C9 303 aa12.13□□□□□ -0.47
KIF3A-201ENST00000378735 BRCA2P51587 3418 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 SMCO3A2RU48 225 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 K7N7A8 449 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 RAMP1O60894 148 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 AMY2BP19961 511 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 GLRA1P23415 457 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 OR3A2P47893 321 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 GLIPR1P48060 266 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 UBE2KP61086 200 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 INSM1Q01101 510 aaPredicted RBP12.12□□□□□ -0.47
KIF3A-201ENST00000378735 C1orf140Q5VVS0 124 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 OR2T2Q6IF00 324 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 ZNF761Q86XN6 746 aaPredicted RBP12.12□□□□□ -0.47
KIF3A-201ENST00000378735 PACRGQ96M98 296 aaPredicted RBP12.12□□□□□ -0.47
KIF3A-201ENST00000378735 WDR92Q96MX6 357 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.12□□□□□ -0.47
KIF3A-201ENST00000378735 B4DEV8 164 aa12.12□□□□□ -0.47
KIF3A-201ENST00000378735 H0YGG7 62 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms