RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 ZNF69Q9UC07 566 aa14.3□□□□□ -0.12
USP11-202ENST00000377078 MPC1Q9Y5U8 109 aa14.3□□□□□ -0.12
USP11-202ENST00000377078 ACOD1A6NK06 481 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 MUC1P15941 1255 aaPredicted RBP14.29□□□□□ -0.12
USP11-202ENST00000377078 SLC2A5P22732 501 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 FASP25445 335 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 UBA52P62987 128 aaKnown RBP14.29□□□□□ -0.12
USP11-202ENST00000377078 PTGES3Q15185 160 aaKnown RBP14.29□□□□□ -0.12
USP11-202ENST00000377078 ATP6AP1Q15904 470 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 C1orf146Q5VVC0 180 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 DEGS2Q6QHC5 323 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 ZNF826PQ6ZT77 177 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 PNLDC1Q8NA58 520 aaKnown RBP14.29□□□□□ -0.12
USP11-202ENST00000377078 BBS1Q8NFJ9 593 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 FAM81AQ8TBF8 368 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 LRRC29Q8WV35 223 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 ASB17Q8WXJ9 295 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 ITFG2Q969R8 447 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 UTP4Q969X6 686 aaKnown RBP14.29□□□□□ -0.12
USP11-202ENST00000377078 HIST1H2AAQ96QV6 131 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 TEAD3Q99594 435 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 RHBDD3Q9Y3P4 386 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 LRP12Q9Y561 859 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 DOCK11Q5JSL3 2073 aa14.29□□□□□ -0.12
USP11-202ENST00000377078 TRAV40A0A0B4J280 105 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 TMEM89A2RUT3 159 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 TMEM210A6NLX4 147 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 TMPRSS2O15393 492 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 GYPAP02724 150 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 ALOX5APP20292 161 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 COMPP49747 757 aaPredicted RBP14.28□□□□□ -0.12
USP11-202ENST00000377078 DAPP51397 102 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 BPIFB3P59826 476 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 BAMBIQ13145 260 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 C11orf91Q3C1V1 193 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 GPR157Q5UAW9 335 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 ZNF841Q6ZN19 808 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 KCTD8Q6ZWB6 473 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 COMMD2Q86X83 199 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 GALNT4Q8N4A0 578 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 GCSAMQ8N6F7 178 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 C3orf56Q8N813 242 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 ZDHHC22Q8N966 263 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 OR1M1Q8NGA1 313 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 DACT3Q96B18 629 aaPredicted RBP14.28□□□□□ -0.12
USP11-202ENST00000377078 CNN2Q99439 309 aaKnown RBP14.28□□□□□ -0.12
USP11-202ENST00000377078 ZNF319Q9P2F9 582 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 AP4S1Q9Y587 144 aa14.28□□□□□ -0.12
USP11-202ENST00000377078 TMEM269A0A1B0GVZ9 245 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 SLC22A31A6NKX4 558 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 ZNF254O75437 659 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 CIB2O75838 187 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 ECDO95905 644 aaPredicted RBP14.27□□□□□ -0.13
USP11-202ENST00000377078 CST4P01036 141 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 LHBP01229 141 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 MRPL3P09001 348 aaKnown RBP14.27□□□□□ -0.13
USP11-202ENST00000377078 PRTN3P24158 256 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 ACTR3P61158 418 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 PRDX4Q13162 271 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 ZNF829Q3KNS6 432 aaPredicted RBP14.27□□□□□ -0.13
USP11-202ENST00000377078 TEX36Q5VZQ5 186 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 SLC36A1Q7Z2H8 476 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 ZDHHC23Q8IYP9 409 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 OR8B12Q8NGG6 310 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 SLC25A28Q96A46 364 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 C12orf43Q96C57 262 aaKnown RBP14.27□□□□□ -0.13
USP11-202ENST00000377078 ITPKCQ96DU7 683 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 ESM1Q9NQ30 184 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 KLHDC2Q9Y2U9 406 aa14.27□□□□□ -0.13
USP11-202ENST00000377078 IGHV3OR16-10A0A075B7F0 116 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 A0A0U1RQV5 110 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 ZNF850A8MQ14 1090 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 C22orf46C9J442 243 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 P2RY10O00398 339 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 IGHV4-38-2P0DP08 117 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 DCTDP32321 178 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 MAP2K3P46734 347 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 RIDAP52758 137 aaKnown RBP14.26□□□□□ -0.13
USP11-202ENST00000377078 FGF12P61328 243 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 CSNK2BP67870 215 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 METTL11BQ5VVY1 283 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 WDR82Q6UXN9 313 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 C9orf139Q6ZV77 190 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 FAM90A1Q86YD7 464 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 ZNF679Q8IYX0 411 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 BCL6BQ8N143 479 aaPredicted RBP14.26□□□□□ -0.13
USP11-202ENST00000377078 PIGCQ92535 297 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 MNTQ99583 582 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 PKP2Q99959 881 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 KAAG1Q9UBP8 84 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 CTSZQ9UBR2 303 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 IKZF2Q9UKS7 526 aa14.26□□□□□ -0.13
USP11-202ENST00000377078 IGHV3OR15-7A0A075B7D8 119 aa14.25□□□□□ -0.13
USP11-202ENST00000377078 ZNF816-ZNF321PA0A0X1KG74 233 aa14.25□□□□□ -0.13
USP11-202ENST00000377078 CCDC182A6NF36 153 aa14.25□□□□□ -0.13
USP11-202ENST00000377078 DNAJC9-AS1A6NH13 148 aa14.25□□□□□ -0.13
USP11-202ENST00000377078 ZNF879B4DU55 563 aa14.25□□□□□ -0.13
USP11-202ENST00000377078 CDIPTO14735 213 aa14.25□□□□□ -0.13
USP11-202ENST00000377078 PRKYO43930 277 aa14.25□□□□□ -0.13
USP11-202ENST00000377078 PLATP00750 562 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms