RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 ZNF221Q9UK13 617 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 MED12LQ86YW9 2145 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 METTL21EPA6NDL7 271 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 MKRN2OSH3BPM6 223 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 RBBP9O75884 186 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 ECDO95905 644 aaPredicted RBP11.23□□□□□ -0.61
TRIM40-206ENST00000376724 PRSS3P35030 304 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 ARR3P36575 388 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 CAPZA1P52907 286 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 TATDN3Q17R31 274 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 PLEKHN1Q494U1 663 aaPredicted RBP11.23□□□□□ -0.61
TRIM40-206ENST00000376724 SFRP4Q6FHJ7 346 aaPredicted RBP11.23□□□□□ -0.61
TRIM40-206ENST00000376724 FAAP20Q6NZ36 180 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 FAM214BQ7L5A3 538 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 C9orf106Q8NAJ2 232 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 CMBLQ96DG6 245 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 CACNG6Q9BXT2 260 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 DPAGT1Q9H3H5 408 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 HRASLSQ9HDD0 168 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 PLSCR2Q9NRY7 297 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 MCUBQ9NWR8 336 aa11.23□□□□□ -0.61
TRIM40-206ENST00000376724 ELF5Q9UKW6 265 aaPredicted RBP11.23□□□□□ -0.61
TRIM40-206ENST00000376724 MGAQ8IWI9 3026 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 A0A1W2PR80 420 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 INMT-MINDY4F8WBC2 141 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 GMDSO60547 372 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 ALDOBP05062 364 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 RAB6AP20340 208 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 VEGFCP49767 419 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 GSK3AP49840 483 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 P2RX3P56373 397 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 AP3S2P59780 193 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 QRFPP83859 136 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 FAM3AP98173 230 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 PLP2Q04941 152 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 TNK1Q13470 666 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 DYRK1AQ13627 763 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 CDK10Q15131 360 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 PCGF3Q3KNV8 242 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 TMEM255AQ5JRV8 349 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 TFAP2EQ6VUC0 442 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 Q6ZSR3 168 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 PNLDC1Q8NA58 520 aaKnown RBP11.22□□□□□ -0.61
TRIM40-206ENST00000376724 CHST4Q8NCG5 386 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 TMEM104Q8NE00 496 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 CCDC54Q8NEL0 328 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 PTX4Q96A99 478 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 C10orf35Q96D05 121 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 ABHD17AQ96GS6 310 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 MS4A3Q96HJ5 214 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 MARVELD1Q9BSK0 173 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 C1QTNF5Q9BXJ0 243 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 BANF2Q9H503 90 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 NUDT15Q9NV35 164 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 ING4Q9UNL4 249 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 LHX6Q9UPM6 363 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 BOD1L1Q8NFC6 3051 aa11.22□□□□□ -0.61
TRIM40-206ENST00000376724 A0A1W2PP11 408 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 FAM230AA0A1W2PPH8 454 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 ANKRD20A5PA0PJZ0 165 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 RAD51DO75771 328 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 LYZL6O75951 148 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 MPIG6BO95866 241 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 TCRBP04435 133 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 PRF1P14222 555 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 GSG1Q2KHT4 349 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 ACSF3Q4G176 576 aaPredicted RBP11.21□□□□□ -0.61
TRIM40-206ENST00000376724 SLC22A6Q4U2R8 563 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 UTS2BQ765I0 119 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 C1QL2Q7Z5L3 287 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 FGD2Q7Z6J4 655 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 BCL2L2Q92843 193 aaPredicted RBP11.21□□□□□ -0.61
TRIM40-206ENST00000376724 CREB3L1Q96BA8 519 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 C7orf50Q9BRJ6 194 aaKnown RBP11.21□□□□□ -0.61
TRIM40-206ENST00000376724 NICN1Q9BSH3 213 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 RGCCQ9H4X1 137 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 ALG5Q9Y673 324 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 DOCK7Q96N67 2140 aa11.21□□□□□ -0.61
TRIM40-206ENST00000376724 hCG_38984A0A1B0GV85 526 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 TMEM14DPA8MWL7 114 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 H7C417 338 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 XRCC2O43543 280 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 CRTAPO75718 401 aaPredicted RBP11.21□□□□□ -0.62
TRIM40-206ENST00000376724 TPPPO94811 219 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 PTGFRP43088 359 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 FOXF2Q12947 444 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 TBRG1Q3YBR2 411 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 VWA1Q6PCB0 445 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 ZNF584Q8IVC4 421 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 CDH26Q8IXH8 852 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 OR6F1Q8NGZ6 308 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 SSC4DQ8WTU2 575 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 TNFAIP8L1Q8WVP5 186 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 AKAP1Q92667 903 aaKnown RBP eCLIP11.21□□□□□ -0.62
TRIM40-206ENST00000376724 WNT2BQ93097 391 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 OR51B6Q9H340 312 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 ELL3Q9HB65 397 aaPredicted RBP11.21□□□□□ -0.62
TRIM40-206ENST00000376724 NKIRAS2Q9NYR9 191 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 MTFP1Q9UDX5 166 aa11.21□□□□□ -0.62
TRIM40-206ENST00000376724 ATPIF1Q9UII2 106 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms