RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 OR2T29Q8NH02 315 aa12.21□□□□□ -0.45
HDAC6-204ENST00000376643 LRRC29Q8WV35 223 aa12.21□□□□□ -0.45
HDAC6-204ENST00000376643 RNF133Q8WVZ7 376 aa12.21□□□□□ -0.45
HDAC6-204ENST00000376643 LHX4Q969G2 390 aa12.21□□□□□ -0.45
HDAC6-204ENST00000376643 RTL8AQ9BWD3 113 aa12.21□□□□□ -0.45
HDAC6-204ENST00000376643 PAPOLGQ9BWT3 736 aaKnown RBP12.21□□□□□ -0.45
HDAC6-204ENST00000376643 CHIAQ9BZP6 476 aa12.21□□□□□ -0.45
HDAC6-204ENST00000376643 NIPAL2Q9H841 368 aa12.21□□□□□ -0.45
HDAC6-204ENST00000376643 C1RLQ9NZP8 487 aa12.21□□□□□ -0.45
HDAC6-204ENST00000376643 hCG_38984A0A1B0GV85 526 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 ARRDC5A6NEK1 342 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 FBP1P09467 338 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 H2BFMP0C1H6 154 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 GSTT1P30711 240 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 ARF6P62330 175 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 LCN8Q6JVE9 175 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 CD300LDQ6UXZ3 194 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 CYP2R1Q6VVX0 501 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 ERI1Q8IV48 349 aaKnown RBP12.2□□□□□ -0.46
HDAC6-204ENST00000376643 GALNT4Q8N4A0 578 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 OR8D4Q8NGM9 314 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 OR10Z1Q8NGY1 313 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 PGAM5Q96HS1 289 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 LRGUKQ96M69 825 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 SMURF1Q9HCE7 757 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 TNFRSF19Q9NS68 423 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 DNAJB11Q9UBS4 358 aa12.2□□□□□ -0.46
HDAC6-204ENST00000376643 H3BN98 237 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 GLCEO94923 617 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 SOX14O95416 240 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 GYPBP06028 91 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 ZNF121P58317 390 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-204ENST00000376643 BLMHQ13867 455 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 NCR3LG1Q68D85 454 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 ZNF826PQ6ZT77 177 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 FAM57BQ71RH2 274 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 OR10G2Q8NGC3 310 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 MED30Q96HR3 178 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 HIST1H2AAQ96QV6 131 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 CCT8L2Q96SF2 557 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 CITED1Q99966 193 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 ABHD6Q9BV23 337 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 TLNRD1Q9H1K6 362 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 MMP27Q9H306 513 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 ARL8BQ9NVJ2 186 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 ARMC1Q9NVT9 282 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 ONECUT1Q9UBC0 465 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 RNF114Q9Y508 228 aa12.19□□□□□ -0.46
HDAC6-204ENST00000376643 SOX21Q9Y651 276 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-204ENST00000376643 GPR137BO60478 399 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 PAHP00439 452 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 LYNP07948 512 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 RAP2AP10114 183 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 ATP6V1B2P21281 511 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 OPRL1P41146 370 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 IER3P46695 156 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 GSK3AP49840 483 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 DEFA6Q01524 100 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 TRIM25Q14258 630 aaKnown RBP12.18□□□□□ -0.46
HDAC6-204ENST00000376643 PDLIM3Q53GG5 364 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-204ENST00000376643 WDR38Q5JTN6 314 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 ATPAF1Q5TC12 328 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-204ENST00000376643 LYPD4Q6UWN0 246 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 WDR82Q6UXN9 313 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 C1orf122Q6ZSJ8 110 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 VMO1Q7Z5L0 202 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 DTX3Q8N9I9 347 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 LY6G5BQ8NDX9 201 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 OR4Q3Q8NH05 313 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 OR5R1Q8NH85 324 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 ZNRF4Q8WWF5 429 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 OTULINQ96BN8 352 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 SGK3Q96BR1 496 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 ZNF556Q9HAH1 456 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 U3KQV3 271 aa12.18□□□□□ -0.46
HDAC6-204ENST00000376643 PRR23D1E9PI22 279 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-204ENST00000376643 PRODHO43272 600 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 HMGN1P05114 100 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 PRR23D2P0DMB1 279 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-204ENST00000376643 GNGT1P63211 74 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 DBPQ10586 325 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-204ENST00000376643 GFOD2Q3B7J2 385 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 LINC01590Q5TEZ4 76 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 DHRS7BQ6IAN0 325 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-204ENST00000376643 PIGWQ7Z7B1 504 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 TIGD4Q8IY51 512 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 C8orf46Q8TAG6 207 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 GIPC3Q8TF64 312 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 UBE2FQ969M7 185 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 CCL13Q99616 98 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 RASSF4Q9H2L5 321 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 HAO2Q9NYQ3 351 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 DNAJC27Q9NZQ0 273 aa12.17□□□□□ -0.46
HDAC6-204ENST00000376643 IGHV3OR15-7A0A075B7D8 119 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 A0A0U1RQK1 487 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 TCRBV5S2A0A599 114 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 ACOD1A6NK06 481 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 B2RBV5 119 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 M0R1W7 72 aa12.16□□□□□ -0.46
HDAC6-204ENST00000376643 GNGT2O14610 69 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms