RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 EIF5AP63241 154 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PCK2Q16822 640 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 VASH2Q86V25 355 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 UBALD1Q8TB05 177 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MCHR2Q969V1 340 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 BORCS8Q96FH0 119 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 MAGT1Q9H0U3 335 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 FAM86C1Q9NVL1 165 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 UBE2J1Q9Y385 318 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 SULT1C2O00338 296 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 DDAH2O95865 285 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PET100P0DJ07 73 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 EDN3P14138 238 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PNLIPRP2P54317 469 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 BIVMQ86UB2 503 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR5L2Q8NGL0 311 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ZNF721Q8TF20 911 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 GPHA2Q96T91 129 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 CFAP54Q96N23 3096 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 PLXNA2O75051 1894 aa12.78□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TRAV14DV4A0A0A6YYC5 116 aa12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 RAB27BO00194 218 aa12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 ABCD4O14678 606 aa12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TTRP02766 147 aa12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 KLK3P07288 261 aaPredicted RBP12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TGIF1Q15583 401 aa12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 LINC00114Q6XXX2 140 aa12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR14L1PQ8NHC6 308 aa12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 OR5AC2Q9NZP5 309 aa12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 COL4A3Q01955 1670 aa12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 KIAA2026Q5HYC2 2103 aa12.77□□□□□ -0.36
TNFRSF1B-201ENST00000376259 TRBV5-7A0A0A0MS05 114 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 GDF9O60383 454 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FCGR2CP31995 323 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RAB30Q15771 203 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CLEC18BQ6UXF7 455 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 YRDCQ86U90 279 aaKnown RBP12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 NAXDQ8IW45 347 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SECTM1Q8WVN6 248 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 IL1F10Q8WWZ1 152 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CFHR5Q9BXR6 569 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RHOFQ9HBH0 211 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CLEC1BQ9P126 229 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 R4GN57 208 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF407Q9C0G0 2248 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RAMP1O60894 148 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZFAND5O76080 213 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 KLK2P20151 261 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CD27P26842 260 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 GLP1RP43220 463 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TAS2R31P59538 309 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RAB5BP61020 215 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PPA1Q15181 289 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PDZD11Q5EBL8 140 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 OR8B12Q8NGG6 310 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TLNRD1Q9H1K6 362 aa12.77□□□□□ -0.37
TNFRSF1B-201ENST00000376259 IGLV1-36A0A0B4J1U3 117 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 MSGN1A6NI15 193 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 C1orf196B1AJZ1 125 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 BCAT2O15382 392 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF217O75362 1048 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 AQP8O94778 261 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CNOT4O95628 575 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF565Q8N9K5 539 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 OR5T1Q8NG75 326 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SCARF2Q96GP6 870 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ZNF845Q96IR2 970 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ALKBH3Q96Q83 286 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FAAP24Q9BTP7 215 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 LDAHQ9H6V9 325 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RASL12Q9NYN1 266 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 LHX6Q9UPM6 363 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 C1QL1O75973 258 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SRSF3P84103 164 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 HSD17B13Q7Z5P4 300 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 AKR7LQ8NHP1 331 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 NANPQ8TBE9 248 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 SLC22A8Q8TCC7 542 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ST7LQ8TDW4 575 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 AMDHD2Q9Y303 409 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PCNX3Q9H6A9 2034 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 IGHV1OR21-1A0A087WYE8 117 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TMEM218A2RU14 115 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PHF1O43189 567 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CRHP06850 196 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 CELA2AP08217 269 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TMEM128Q5BJH2 165 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 FBXW12Q6X9E4 464 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 ETV3LQ6ZN32 361 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 Q7L0L9 218 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 RAB11FIP2Q7L804 512 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PAPOLGQ9BWT3 736 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 LANCL2Q9NS86 450 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TNFSF18Q9UNG2 199 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 B3GALT5Q9Y2C3 310 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 PI4KAP42356 2102 aa12.76□□□□□ -0.37
TNFRSF1B-201ENST00000376259 TP53I11O14683 189 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 HSPA12AO43301 675 aa12.75□□□□□ -0.37
TNFRSF1B-201ENST00000376259 GP1BAP07359 652 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms