RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ZNF878C9JN71 531 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 RER1O15258 196 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 IFNA4P05014 189 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 DUX4L2P0CJ85 424 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 DUX4L3P0CJ86 424 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 DUX4L4P0CJ87 422 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 DUX4L5P0CJ88 424 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 DUX4L6P0CJ89 424 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 DUX4L7P0CJ90 424 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 GTF2F2P13984 249 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 OTX2P32243 289 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 FAUP35544 74 aaKnown RBP12.33□□□□□ -0.44
MSH5-202ENST00000375740 SNTB1Q13884 538 aaKnown RBP12.33□□□□□ -0.44
MSH5-202ENST00000375740 ZNF813Q6ZN06 617 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 OR51E1Q8TCB6 317 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 NECAB3Q96P71 396 aaPredicted RBP12.33□□□□□ -0.44
MSH5-202ENST00000375740 DUX4Q9UBX2 424 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 ZNF629Q9UEG4 869 aaPredicted RBP12.33□□□□□ -0.44
MSH5-202ENST00000375740 PADI1Q9ULC6 663 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 A0A1B0GTI1 187 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 RNF222A6NCQ9 220 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 TLX3O43711 291 aaPredicted RBP12.33□□□□□ -0.44
MSH5-202ENST00000375740 RD3LP0DJH9 198 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 SLC2A1P11166 492 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 CLDN6P56747 220 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 HABP2Q14520 560 aaPredicted RBP12.33□□□□□ -0.44
MSH5-202ENST00000375740 KCNMB1Q16558 191 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 PPP1R32Q7Z5V6 425 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 ADGRE4PQ86SQ3 457 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 BEST3Q8N1M1 668 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 NKAIN3Q8N8D7 197 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 DTWD2Q8NBA8 298 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 OR52N4Q8NGI2 321 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 GPX8Q8TED1 209 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 FOXRED1Q96CU9 486 aaPredicted RBP12.33□□□□□ -0.44
MSH5-202ENST00000375740 ARRDC1-AS1Q9H2J1 176 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 CNTD2Q9H8S5 307 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 MIOXQ9UGB7 285 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 LOXL2Q9Y4K0 774 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 DMDP11532 3685 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 KANTRA0A1W2PQU2 76 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 PMS2P1A4D2B8 440 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 OR5H14A6NHG9 310 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 TCN2P20062 427 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 Q0VFX4 171 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 SGCAQ16586 387 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 MOGAT2Q3SYC2 334 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 RAB12Q6IQ22 244 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 ARMC10Q8N2F6 343 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 KCNRGQ8N5I3 272 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 SEH1LQ96EE3 360 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 UCN2Q96RP3 112 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 EXO5Q9H790 373 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 PNRC2Q9NPJ4 139 aaKnown RBP12.32□□□□□ -0.44
MSH5-202ENST00000375740 ZFP57Q9NU63 452 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 CBR3O75828 277 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 IGHEP01854 428 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 CD3DP04234 171 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 RGS19P49795 217 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 SDK2Q58EX2 2172 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 PHYHD1Q5SRE7 291 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 ETV3LQ6ZN32 361 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 DBX2Q6ZNG2 339 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 TIPARPQ7Z3E1 657 aaKnown RBP12.32□□□□□ -0.44
MSH5-202ENST00000375740 TMED4Q7Z7H5 227 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 SPAG16Q8N0X2 631 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 CPNE2Q96FN4 548 aaPredicted RBP12.32□□□□□ -0.44
MSH5-202ENST00000375740 ZNF385AQ96PM9 386 aaKnown RBP12.32□□□□□ -0.44
MSH5-202ENST00000375740 SOX7Q9BT81 388 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 POFUT1Q9H488 388 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 ZMAT3Q9HA38 289 aaKnown RBP12.32□□□□□ -0.44
MSH5-202ENST00000375740 ZNF319Q9P2F9 582 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 TCFL5Q9UL49 500 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 ZDBF2Q9HCK1 2354 aa12.32□□□□□ -0.44
MSH5-202ENST00000375740 A0A1W2PPE3 182 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 AKAIN1P0CW23 69 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 LIPCP11150 499 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 ANOS1P23352 680 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 CD96P40200 585 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 ZNF121P58317 390 aaPredicted RBP12.31□□□□□ -0.44
MSH5-202ENST00000375740 RHOUQ7L0Q8 258 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 CLEC1AQ8NC01 280 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 OR5D14Q8NGL3 314 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 OR4A4PQ8NGN8 299 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 OR6N1Q8NGY5 312 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 INTS12Q96CB8 462 aaKnown RBP12.31□□□□□ -0.44
MSH5-202ENST00000375740 ZNF251Q9BRH9 671 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 PDCD10Q9BUL8 212 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 TNFSF18Q9UNG2 199 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 COL27A1Q8IZC6 1860 aaPredicted RBP12.31□□□□□ -0.44
MSH5-202ENST00000375740 A0A0D9SG52 128 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 A0A0J9YW62 118 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 RAB19A4D1S5 217 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 SNAPINO95295 136 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 PTAFRP25105 342 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 MPLP40238 635 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 PMPCAQ10713 525 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 RBM39Q14498 530 aaKnown RBP12.31□□□□□ -0.44
MSH5-202ENST00000375740 MPPED2Q15777 294 aa12.31□□□□□ -0.44
MSH5-202ENST00000375740 C6orf15Q6UXA7 325 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms