RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 HSD17B6O14756 317 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 CARD18P57730 90 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 ERHP84090 104 aaKnown RBP9.2□□□□□ -0.94
PTCH1-204ENST00000375290 PRAMEF20Q5VT98 475 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 C17orf99Q6UX52 265 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF707Q96C28 371 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-204ENST00000375290 OBP2BQ9NPH6 170 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 A0A1W2PR48 441 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 OGG1O15527 345 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 FUT3P21217 361 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 HAGHQ16775 308 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 MUCL1Q96DR8 90 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 S1PR3Q99500 378 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 NKX2-2O95096 273 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 CER1O95813 267 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 CD79AP11912 226 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 VDAC1P21796 283 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 CLDN17P56750 224 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 OR10D4PQ8NGN7 298 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 NPRL2Q8WTW4 380 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 HYAL4Q2M3T9 481 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 LAIR1Q6GTX8 287 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 BTNL3Q6UXE8 466 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 MRGPRGQ86SM5 289 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 H1FOOQ8IZA3 346 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-204ENST00000375290 OSGIN2Q9Y236 505 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 SPNP16150 400 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF740Q8NDX6 193 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 MARCH1Q8TCQ1 289 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 ATP5SQ99766 215 aa9.2□□□□□ -0.94
PTCH1-204ENST00000375290 TRBV11-1A0A0K0K1C0 115 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 UPK1AO00322 258 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ATF1P18846 271 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 TBXA2RP21731 343 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 CD38P28907 300 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 NR0B2Q15466 257 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ZFP62Q8NB50 900 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 STXBP6Q8NFX7 210 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 KTI12Q96EK9 354 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 MMP25Q9NPA2 562 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 CSNK1EP49674 416 aaKnown RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF273Q14593 569 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 C1orf174Q8IYL3 243 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 TMEM176BQ3YBM2 270 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 UBE3DQ7Z6J8 389 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 BCORP1Q8N888 145 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 FAM181AQ8N9Y4 354 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 TRIB1Q96RU8 372 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 C20orf24Q9BUV8 137 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 CALHM2Q9HA72 323 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF891A8MT65 544 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 GALR2O43603 387 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 CIDEAO60543 219 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 CTSVO60911 334 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ARL16Q0P5N6 197 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 SMIM21Q3B7S5 101 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 FAM209AQ5JX71 171 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 OR8G2PQ6IF36 304 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 GABRQQ9UN88 632 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 NOSIPQ9Y314 301 aaKnown RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 FITM1A5D6W6 292 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 NSUN5P2Q63ZY6 315 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ARSGQ96EG1 525 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 NAA60Q9H7X0 242 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 B9D1Q9UPM9 204 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 AQP7P3A6NL99 342 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 KLF9Q13886 244 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 UBE2V2Q15819 145 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 RPEL1Q2QD12 228 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF542PQ5EBM4 170 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ATG101Q9BSB4 218 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 TNFSF18Q9UNG2 199 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF831Q5JPB2 1677 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF320A2RRD8 509 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 MRPL58Q14197 206 aaKnown RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 FAM180BQ6P0A1 224 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 OR2T10Q8NGZ9 312 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ABHD5Q8WTS1 349 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ZNF845Q96IR2 970 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 SMCHD1A6NHR9 2005 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 ZFPL1O95159 310 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 SNRPNP63162 240 aaKnown RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 MRPL43Q8N983 215 aaKnown RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 GALMQ96C23 342 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 GSX1Q9H4S2 264 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 MARCH5Q9NX47 278 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 COA3Q9Y2R0 106 aaPredicted RBP9.19□□□□□ -0.94
PTCH1-204ENST00000375290 PIAS3Q9Y6X2 628 aa9.19□□□□□ -0.94
PTCH1-204ENST00000375290 SSX8Q7RTT4 187 aa9.18□□□□□ -0.94
PTCH1-204ENST00000375290 TMEM178AQ8NBL3 297 aa9.18□□□□□ -0.94
PTCH1-204ENST00000375290 NPAS1Q99742 590 aa9.18□□□□□ -0.94
PTCH1-204ENST00000375290 SLC22A13Q9Y226 551 aa9.18□□□□□ -0.94
PTCH1-204ENST00000375290 NTNG1Q9Y2I2 539 aa9.18□□□□□ -0.94
PTCH1-204ENST00000375290 TIMP1P01033 207 aa9.18□□□□□ -0.94
PTCH1-204ENST00000375290 GUSBP08236 651 aa9.18□□□□□ -0.94
PTCH1-204ENST00000375290 CCL5P13501 91 aa9.18□□□□□ -0.94
PTCH1-204ENST00000375290 CCR5P51681 352 aa9.18□□□□□ -0.94
PTCH1-204ENST00000375290 GGTLC2Q14390 218 aa9.18□□□□□ -0.94
PTCH1-204ENST00000375290 MSRB3Q8IXL7 192 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms