RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PLPP5Q8NEB5 264 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 OTOSQ8NHW6 89 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 CYB5D2Q8WUJ1 264 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 SHDQ96IW2 340 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 ADGRG7Q96K78 797 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 VN1R3Q9BXE9 311 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 GPR87Q9BY21 358 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 ATG2AQ2TAZ0 1938 aa11.48□□□□□ -0.57
PRPF4-201ENST00000374198 TGOLN2O43493 480 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 METTL15P1P0C7V9 234 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 CPMP14384 443 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 KLK2P20151 261 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 FPR2P25090 351 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 INSM1Q01101 510 aaPredicted RBP11.47□□□□□ -0.57
PRPF4-201ENST00000374198 HAGHQ16775 308 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 METRNLQ641Q3 311 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 APCDD1LQ8NCL9 501 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 OR52E1Q8NGJ3 308 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 SCGB3A2Q96PL1 93 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 IL21Q9HBE4 155 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 RHBDD3Q9Y3P4 386 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 RBFOX3A6NFN3 312 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 GCGP01275 180 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 SOD2P04179 222 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 RPS2P15880 293 aaKnown RBP11.47□□□□□ -0.57
PRPF4-201ENST00000374198 GABRR1P24046 479 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 APOBEC1P41238 236 aaKnown RBP11.47□□□□□ -0.57
PRPF4-201ENST00000374198 DNASE1L1P49184 302 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 GNG10P50151 68 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 ID2Q02363 134 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 FAM78AQ5JUQ0 283 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 VAX1Q5SQQ9 334 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 THEM4Q5T1C6 240 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 RNF44Q7L0R7 432 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 ZNF429Q86V71 674 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 TMEM25Q86YD3 366 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 TMEM156Q8N614 296 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 KREMEN2Q8NCW0 462 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 SH3BGRL3Q9H299 93 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 RIMS4Q9H426 269 aaPredicted RBP11.47□□□□□ -0.57
PRPF4-201ENST00000374198 PLEKHA2Q9HB19 425 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 WFDC1Q9HC57 220 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 FOXD3Q9UJU5 478 aaPredicted RBP11.47□□□□□ -0.57
PRPF4-201ENST00000374198 EYSQ5T1H1 3165 aa11.47□□□□□ -0.57
PRPF4-201ENST00000374198 SPINT1O43278 529 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 DFFBO76075 338 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 KAT7O95251 611 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 AKT2P31751 481 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 P2RY1P47900 373 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 CEBPGP53567 150 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 MFGE8Q08431 387 aaPredicted RBP11.46□□□□□ -0.57
PRPF4-201ENST00000374198 UNC119Q13432 240 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 PCK2Q16822 640 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 TMEM215Q68D42 235 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 VITQ6UXI7 678 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 SLC35D2Q76EJ3 337 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 LYPD6Q86Y78 171 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 LRRC75AQ8NAA5 344 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 OR2I1PQ8NGU4 316 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 FAM213BQ8TBF2 198 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 TVP23CQ96ET8 276 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 C5orf34Q96MH7 638 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 CAPN10Q9HC96 672 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 TCFL5Q9UL49 500 aa11.46□□□□□ -0.57
PRPF4-201ENST00000374198 MRPS18CQ9Y3D5 142 aaKnown RBP11.46□□□□□ -0.57
PRPF4-201ENST00000374198 FIGNL2A6NMB9 653 aa11.46□□□□□ -0.58
PRPF4-201ENST00000374198 FTCDNL1E5RQL4 147 aa11.46□□□□□ -0.58
PRPF4-201ENST00000374198 GRK6P43250 576 aa11.46□□□□□ -0.58
PRPF4-201ENST00000374198 DLX2Q07687 328 aaPredicted RBP11.46□□□□□ -0.58
PRPF4-201ENST00000374198 RAB35Q15286 201 aa11.46□□□□□ -0.58
PRPF4-201ENST00000374198 ALG10Q5BKT4 473 aa11.46□□□□□ -0.58
PRPF4-201ENST00000374198 OTPQ5XKR4 325 aa11.46□□□□□ -0.58
PRPF4-201ENST00000374198 RTN4RL2Q86UN3 420 aa11.46□□□□□ -0.58
PRPF4-201ENST00000374198 C1orf87Q8N0U7 546 aa11.46□□□□□ -0.58
PRPF4-201ENST00000374198 IL17BQ9UHF5 180 aa11.46□□□□□ -0.58
PRPF4-201ENST00000374198 LSM5Q9Y4Y9 91 aaKnown RBP11.46□□□□□ -0.58
PRPF4-201ENST00000374198 GOLGA4Q13439 2230 aaKnown RBP11.46□□□□□ -0.58
PRPF4-201ENST00000374198 PRUNE2Q8WUY3 3088 aa11.46□□□□□ -0.58
PRPF4-201ENST00000374198 CDRT15L2A8MXV6 281 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 GEMIN2O14893 280 aaKnown RBP11.45□□□□□ -0.58
PRPF4-201ENST00000374198 SRP19P09132 144 aaKnown RBP11.45□□□□□ -0.58
PRPF4-201ENST00000374198 SLC35G4P0C7Q5 338 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 GIMD1P0DJR0 217 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 GLRA1P23415 457 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 MSX1P28360 303 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 RAB28P51157 221 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 MRPS11P82912 194 aaKnown RBP11.45□□□□□ -0.58
PRPF4-201ENST00000374198 EXOSC7Q15024 291 aaKnown RBP11.45□□□□□ -0.58
PRPF4-201ENST00000374198 ZNF765Q7L2R6 523 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 OR13C3Q8NGS6 347 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 SMARCD2Q92925 531 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 CNTD2Q9H8S5 307 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 GRHPRQ9UBQ7 328 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 B9D1Q9UPM9 204 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 HIF3AQ9Y2N7 669 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 PNLIPP16233 465 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 LTBRP36941 435 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 CCL20P78556 96 aa11.45□□□□□ -0.58
PRPF4-201ENST00000374198 COTL1Q14019 142 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms