RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 DLL4Q9NR61 685 aa7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 NOSIPQ9Y314 301 aaKnown RBP7.65□□□□□ -1.18
SNRNP40-202ENST00000373720 CXCL13O43927 109 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 CDC14BO60729 498 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 TNFSF15O95150 251 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 CD3DP04234 171 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 GLAP06280 429 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 HIST1H1DP16402 221 aaKnown RBP7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 DTYMKP23919 212 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 ITGA3P26006 1051 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 CDAP32320 146 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 MAGEB1P43366 347 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 SLC6A9P48067 706 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 SELENOPP49908 381 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 LHX2P50458 406 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 PRKXP51817 358 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 EFNB2P52799 333 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 AP2S1P53680 142 aaPredicted RBP7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 ATP1B3P54709 279 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 CLDN15P56746 228 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 FOXL2P58012 376 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 RAB14P61106 215 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 IFITM2Q01629 132 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 PLP2Q04941 152 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 MALLQ13021 153 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 HES3Q5TGS1 186 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 ZNF468Q5VIY5 522 aaPredicted RBP7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 B3GNTL1Q67FW5 361 aaPredicted RBP7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 TMEM42Q69YG0 159 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 TMEM53Q6P2H8 277 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 IDO2Q6ZQW0 420 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 COLCA1Q6ZS62 124 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 GALNTL5Q7Z4T8 443 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 LINC00596Q86U02 117 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 YRDCQ86U90 279 aaKnown RBP7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 SLC25A42Q86VD7 318 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 MCEMP1Q8IX19 187 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 OR5AS1Q8N127 324 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 C9orf62Q8N4C0 152 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 BPIFB2Q8N4F0 458 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 PAQR4Q8N4S7 273 aaPredicted RBP7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 IL22RA1Q8N6P7 574 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 MDS2Q8NDY4 140 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 TMEM185AQ8NFB2 350 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 Q8NFD4 153 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 OR11H7Q8NGC8 314 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 OR51S1Q8NGJ8 323 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 OR5L1Q8NGL2 311 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 OR5M1Q8NGP8 315 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 OR2T35Q8NGX2 323 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 LILRB4Q8NHJ6 448 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 TERB2Q8NHR7 220 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 TNFAIP8L1Q8WVP5 186 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 NKD1Q969G9 470 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 ORAI1Q96D31 301 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 FOXN4Q96NZ1 517 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 PHB2Q99623 299 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 C1QTNF5Q9BXJ0 243 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 METTL9Q9H1A3 318 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 LPAR5Q9H1C0 372 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 OR10A4Q9H209 315 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 PLK3Q9H4B4 646 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 GPR35Q9HC97 309 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 ZNF69Q9UC07 566 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 MGAT4AQ9UM21 535 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 HSPB11Q9Y547 144 aa7.64□□□□□ -1.19
SNRNP40-202ENST00000373720 A0A0D9SG52 128 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 ZNF816-ZNF321PA0A0X1KG74 233 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 TEX51A0A1B0GUA7 166 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 CDRT15L2A8MXV6 281 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 F5H5K5 113 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 PYCARD-AS1I3L0S3 204 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 M0R233 179 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 RRP8O43159 456 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 IL2RAP01589 272 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 CD8AP01732 235 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 CSTBP04080 98 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 AMY2AP04746 511 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 CELA2AP08217 269 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 OR4E1P0C645 316 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 LIPCP11150 499 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 NFYAP23511 347 aaPredicted RBP7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 TGFBR3Q03167 851 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 C19orf57Q0VDD7 668 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 DBPQ10586 325 aaPredicted RBP7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 MRPL49Q13405 166 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 OR8B8Q15620 311 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 C4orf46Q504U0 113 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 TMEM128Q5BJH2 165 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 IGFL2Q6UWQ7 119 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 PLXDC2Q6UX71 529 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 RFPL4BQ6ZWI9 263 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 TRAPPC6BQ86SZ2 158 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 TMEM200AQ86VY9 491 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 HOGA1Q86XE5 327 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 GALNT16Q8N428 558 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 C12orf45Q8N5I9 185 aaPredicted RBP7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 SUMF1Q8NBK3 374 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 CHST4Q8NCG5 386 aa7.63□□□□□ -1.19
SNRNP40-202ENST00000373720 OR2AK2Q8NG84 335 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms