RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 DUX4L3P0CJ86 424 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 DUX4L4P0CJ87 422 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 DUX4L5P0CJ88 424 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 DUX4L6P0CJ89 424 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 DUX4L7P0CJ90 424 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 LIFP15018 202 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 VAMP1P23763 118 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 HOXA6P31267 233 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 LUMP51884 338 aaPredicted RBP11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 EXT1Q16394 746 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 LRRC37A5PQ49AS3 106 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 TMEM128Q5BJH2 165 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 SPERTQ8NA61 448 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 PAQR8Q8TEZ7 354 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 MRPS24Q96EL2 167 aaKnown RBP11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 ARHGAP5-AS1Q96IT6 56 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 CYYR1Q96J86 154 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 URM1Q9BTM9 101 aaKnown RBP11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 C5orf66Q9H5L9 145 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 COQ3Q9NZJ6 369 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 MBD2Q9UBB5 411 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 DUX4Q9UBX2 424 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 SHPKQ9UHJ6 478 aa11.04□□□□□ -0.64
TSPAN6-201ENST00000373020 GDF9O60383 454 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 EIF1BO60739 113 aaKnown RBP11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 VAMP5O95183 116 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 CCL3P10147 92 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 AKR1C4P17516 323 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 FPR2P25090 351 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 HOXD11P31277 338 aaPredicted RBP11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 SUCLG1P53597 346 aaKnown RBP11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 DTX1Q86Y01 620 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 GJC3Q8NFK1 279 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 IFI44Q8TCB0 444 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 CASTOR1Q8WTX7 329 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 PGAM5Q96HS1 289 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 ZNF75AQ96N20 296 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 IER2Q9BTL4 223 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 NMES1Q9C002 83 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 CHST5Q9GZS9 411 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 OR10A2Q9H208 303 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 GLS2Q9UI32 602 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 FOXD3Q9UJU5 478 aaPredicted RBP11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 SIT1Q9Y3P8 196 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 FLVCR1Q9Y5Y0 555 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 LGALS8O00214 317 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 YKT6O15498 198 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 CRTAPO75718 401 aaPredicted RBP11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 KLF7O75840 302 aaPredicted RBP11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 DHRS3O75911 302 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 DSCR4P56555 118 aaPredicted RBP11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 KISS1Q15726 138 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 SGCAQ16586 387 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 RSPO1Q2MKA7 263 aaPredicted RBP11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 GFOD2Q3B7J2 385 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 SMUG1Q53HV7 270 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 FAM74A1Q5RGS3 127 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 NSUN5P2Q63ZY6 315 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 TFAP2EQ6VUC0 442 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 SLC16A14Q7RTX9 510 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 CCDC54Q8NEL0 328 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 OR9K2Q8NGE7 335 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 OR10K1Q8NGX5 313 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 THAP6Q8TBB0 222 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 M1APQ8TC57 530 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 ZNF385AQ96PM9 386 aaKnown RBP11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 GPER1Q99527 375 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 TM2D1Q9BX74 207 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 HS3ST3B1Q9Y662 390 aa11.03□□□□□ -0.64
TSPAN6-201ENST00000373020 TEX46H3BTG2 121 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 ZIC3O60481 467 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 CA11O75493 328 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 SERPINF1P36955 418 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 PTGFRP43088 359 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 ATXN7L3Q14CW9 347 aaPredicted RBP11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 KCTD9Q7L273 389 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 ARMC10Q8N2F6 343 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 PNLDC1Q8NA58 520 aaKnown RBP11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 STOML3Q8TAV4 291 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 PP6455Q8WZ26 134 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 C10orf35Q96D05 121 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 LIN37Q96GY3 246 aaPredicted RBP11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 ZNF471Q9BX82 626 aaPredicted RBP11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 ZNF160Q9HCG1 818 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 CHMP1AQ9HD42 196 aaPredicted RBP11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 OSGIN2Q9Y236 505 aa11.02□□□□□ -0.65
TSPAN6-201ENST00000373020 FAM25EA8MYX2 175 aa11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 F8VVB4 439 aa11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 F8VWA3 439 aa11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 NTN3O00634 580 aaPredicted RBP11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 DHHO43323 396 aa11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 SFT2D2O95562 160 aa11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 GP1BAP07359 652 aa11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 PSMB6P28072 239 aa11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 SSR4P51571 173 aa11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 PPIAP62937 165 aaKnown RBP11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 UBE2V2Q15819 145 aa11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 C1QL2Q7Z5L3 287 aa11.01□□□□□ -0.65
TSPAN6-201ENST00000373020 STPG2Q8N412 459 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms