RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 KTI12Q96EK9 354 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-203ENST00000372407 GDF15Q99988 308 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 C1QTNF6Q9BXI9 259 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 TGIF2Q9GZN2 237 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 MTFP1Q9UDX5 166 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 PMS2P1A4D2B8 440 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 DEFA4P12838 97 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 FAHP16930 419 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 DHODHQ02127 395 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 TLE1Q04724 770 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 AANATQ16613 207 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 OSR2Q8N2R0 312 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF485Q8NCK3 441 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 GPR119Q8TDV5 335 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 EID2BQ96D98 161 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 C4orf45Q96LM5 186 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 TINAGL1Q9GZM7 467 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-203ENST00000372407 LAMP3Q9UQV4 416 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 LRP12Q9Y561 859 aa10.29□□□□□ -0.76
PTPRF-203ENST00000372407 SIRPB1O00241 398 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 DTYMKP23919 212 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 CLDN15P56746 228 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 PCBP3P57721 371 aaKnown RBP10.28□□□□□ -0.76
PTPRF-203ENST00000372407 PCBP4P57723 403 aaKnown RBP10.28□□□□□ -0.76
PTPRF-203ENST00000372407 TMEM88Q6PEY1 159 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 LILRA6Q6PI73 481 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 DEGS2Q6QHC5 323 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 ZDHHC23Q8IYP9 409 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 OR1N1Q8NGS0 311 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 FGF14Q92915 247 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 SARAFQ96BY9 339 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 SPACA9Q96E40 222 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-203ENST00000372407 S1PR3Q99500 378 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 MAGT1Q9H0U3 335 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 C20orf141Q9NUB4 165 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF816-ZNF321PA0A0X1KG74 233 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 PRSS44E7EML9 344 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 COX5AP20674 150 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 HOXD11P31277 338 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-203ENST00000372407 THBS4P35443 961 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 HAAOP46952 286 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 GPR12P47775 334 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 UBE2G1P62253 170 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 C11orf87Q6NUJ2 197 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 BPIFCQ8NFQ6 507 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 RPUSD4Q96CM3 377 aaKnown RBP10.28□□□□□ -0.76
PTPRF-203ENST00000372407 TPPP3Q9BW30 176 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 NUDT9Q9BW91 350 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 ANKUB1A6NFN9 424 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 CNIH1O95406 144 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 ADH4P08319 380 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 AGFG1P52594 562 aaKnown RBP10.28□□□□□ -0.76
PTPRF-203ENST00000372407 TAS2R45P59539 299 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 RAC1P63000 192 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 OR2B11Q5JQS5 317 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 CDC20BQ86Y33 519 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF561Q8N587 486 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 ZFP62Q8NB50 900 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-203ENST00000372407 OR4S1Q8NGB4 309 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 RXFP4Q8TDU9 374 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 SPSB1Q96BD6 273 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 SMIM7Q9BQ49 75 aa10.28□□□□□ -0.76
PTPRF-203ENST00000372407 IGHV3-64DA0A0J9YX35 117 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 METTL12A8MUP2 240 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 MBTPS2O43462 519 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 SCO1O75880 301 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 AQP8O94778 261 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 B4GALT1P15291 398 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 GLRA1P23415 457 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 INSM1Q01101 510 aaPredicted RBP10.27□□□□□ -0.76
PTPRF-203ENST00000372407 HES1Q14469 280 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 ZNF787Q6DD87 383 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 SPEM1Q8N4L4 309 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 OR4F5Q8NH21 305 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 EDARADDQ8WWZ3 215 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 HGDQ93099 445 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 OR4F4Q96R69 305 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 MARVELD1Q9BSK0 173 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 CHST6Q9GZX3 395 aa10.27□□□□□ -0.76
PTPRF-203ENST00000372407 GP1BAP07359 652 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 GPR3P46089 330 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 FUT6P51993 359 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 CEACAM16Q2WEN9 425 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 ACOT6Q3I5F7 207 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-203ENST00000372407 WDR38Q5JTN6 314 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 AMER3Q8N944 861 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 ZDHHC22Q8N966 263 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 TVP23CQ96ET8 276 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 DEFB127Q9H1M4 99 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF768Q9H5H4 540 aaKnown RBP10.27□□□□□ -0.77
PTPRF-203ENST00000372407 SBF1O95248 1867 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 KIF13BQ9NQT8 1826 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 CTSVO60911 334 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 IL2RAP01589 272 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 FUT3P21217 361 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 H3F3AP84243 136 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 PDZD11Q5EBL8 140 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 UBE3DQ7Z6J8 389 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 LINC01555Q8NAE3 123 aa10.27□□□□□ -0.77
PTPRF-203ENST00000372407 FOXQ1Q9C009 403 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms